Non-Coding RNA Search

unkn-MI-P-NA-aei-b-04-1-UM.s1.ab1

Sequence:


               
               TTTTTTTTTTTTTTTTCTGATTCATAGGTTTAGCTGAACTCGGGCCCTGCTTGAAAAATG
AGGTTTACATAGTTTATATTATGTACATAAACTACTGATTTACATTGATTTACACATGAT
TGGTGTCTAATTTATTAATCAGCACGCAGTATGTAAATTTGCTGAAAGGAAATCAAGATT
TTAAAATAAGTTTTCCATAATATCCATAAACATTTACGCTGGTGTAAATGTGAAACCTAC
ACCTAACGTTAATACCAGCTTTCTTGCCAATGGGATAGTCATGTATGTTGCTTGGTGAAG
ACAAATTCTTTCTTGAATATCAGCTGGCCACTTGATAACATAGCTACTTGCAAAAAAGAG
TAGTTTACTTCGCTTCCACTGTATGCAAATAAATGTAAACTCCATTTTGCATTTAGTGAG
ACATTTATAGACATTATGCCAACCGCGATGGAAAATTTATACCACTGGAGCAAATGCAAT
CTTTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTCTGATTCATAGGTTTAGCTGAACTCGGGCCCTGCTTGAAAAATG
AGGTTTACATAGTTTATATTATGTACATAAACTACTGATTTACATTGATTTACACATGAT
TGGTGTCTAATTTATTAATCAGCACGCAGTATGTAAATTTGCTGAAAGGAAATCAAGATT
TTAAAATAAGTTTTCCATAATATCCATAAACATTTACGCTGGTGTAAATGTGAAACCTAC
ACCTAACGTTAATACCAGCTTTCTTGCCAATGGGATAGTCATGTATGTTGCTTGGTGAAG
ACAAATTCTTTCTTGAATATCAGCTGGCCACTTGATAACATAGCTACTTGCAAAAAAGAG
TAGTTTACTTCGCTTCCACTGTATGCAAATAAATGTAAACTCCATTTTGCATTTAGTGAG
ACATTTATAGACATTATGCCAACCGCGATGGAAAATTTATACCACTGGAGCAAATGCAAT
CTTTGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               39-306, - strand, RNAz p=0.971062

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               39-306, - strand, RNAz p=0.971062

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-478, gnl|bosTau2|chr1 (35611147-35611629)
               

               
               4-478, gnl|Hg17|chr3 (117006927-117007409)
               

               
               4-478, gnl|Mm7|chr16 (41939489-41939009)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-478, gnl|bosTau2|chr1 (35611147-35611629)
               

               
               4-478, gnl|Hg17|chr3 (117006927-117007409)
               

               
               4-478, gnl|Mm7|chr16 (41939489-41939009)

	4-478, gnl\|bosTau2\|chr1 (35611147-35611629)
	4-478, gnl\|Hg17\|chr3 (117006927-117007409)
	4-478, gnl\|Mm7\|chr16 (41939489-41939009)