Non-Coding RNA Search

unkn-MI-P-NA-aeo-e-11-1-UM.s1

Sequence:


               
               TTTTTTTTTTTTTTTTTTCATCTCNACTGAAACTATCCAAACACTGTGCNTGAGATTTAT
TTTTTAAAGAGACTATTAGAGAAGAGCACTTGGATTTGAAAAGGACAATGCCATACACTT
TCTATGCCTCCTGTTCAGAGAGTGATGGCCTGCCCAACAAACTTGCCACATCAAAAACCT
GTTTAATAATTCTCCATAAAGGAACGATGTTTTACAAAGCTATAGCACCAATCAGGTAAC
AATAGATCAATCACGTTTTCCTAAAATGTAGTATTTGCGGTTGCAGCCTGGATAAGTAAT
TACATTCAAAGTAACGTACAAGGAGCTATCAATCCCCATTCATTCAGCACCCATTCACTG
AGCCAAGAGCTTTGCTGGGCTTGGNGATATAAAAATGAATACGACACAGCTGCTTTACTT
CCAGCTAAAAGAATACACCTAAACAAAGAGTTACAGGACAATGTGTTAAGTGCTATAATA
GAGGTGTGCCCAAAGGGCTGAGGGCCAAAGGAAGAAGCTATAAATTCTTCCTGGGAAATC
AAGCAAGTGAGGGGAGATGTAAACGGAGGTATGGTGATGTTTTCTTGTGATAAACTCGAC
TTTTCTTTACCGTGTTGTCAAAAGTGAGGCAGTAATTTTAAGATTTATGAACTGCGCCAA
CTGCAAGTGTTAAACCGGTCTGCAAGCTGGGTTCGCTTATGTCTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTCATCTCNACTGAAACTATCCAAACACTGTGCNTGAGATTTAT
TTTTTAAAGAGACTATTAGAGAAGAGCACTTGGATTTGAAAAGGACAATGCCATACACTT
TCTATGCCTCCTGTTCAGAGAGTGATGGCCTGCCCAACAAACTTGCCACATCAAAAACCT
GTTTAATAATTCTCCATAAAGGAACGATGTTTTACAAAGCTATAGCACCAATCAGGTAAC
AATAGATCAATCACGTTTTCCTAAAATGTAGTATTTGCGGTTGCAGCCTGGATAAGTAAT
TACATTCAAAGTAACGTACAAGGAGCTATCAATCCCCATTCATTCAGCACCCATTCACTG
AGCCAAGAGCTTTGCTGGGCTTGGNGATATAAAAATGAATACGACACAGCTGCTTTACTT
CCAGCTAAAAGAATACACCTAAACAAAGAGTTACAGGACAATGTGTTAAGTGCTATAATA
GAGGTGTGCCCAAAGGGCTGAGGGCCAAAGGAAGAAGCTATAAATTCTTCCTGGGAAATC
AAGCAAGTGAGGGGAGATGTAAACGGAGGTATGGTGATGTTTTCTTGTGATAAACTCGAC
TTTTCTTTACCGTGTTGTCAAAAGTGAGGCAGTAATTTTAAGATTTATGAACTGCGCCAA
CTGCAAGTGTTAAACCGGTCTGCAAGCTGGGTTCGCTTATGTCTGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               408-597, + strand, RNAz p=0.751463

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               408-597, + strand, RNAz p=0.751463

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-681, gnl|bosTau2|chr9 (47753979-47753310)
               

               
               12-681, gnl|Hg17|chr6 (144334688-144335356)
               

               
               12-681, gnl|Mm7|chr10 (12809907-12809237)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-681, gnl|bosTau2|chr9 (47753979-47753310)
               

               
               12-681, gnl|Hg17|chr6 (144334688-144335356)
               

               
               12-681, gnl|Mm7|chr10 (12809907-12809237)

	12-681, gnl\|bosTau2\|chr9 (47753979-47753310)
	12-681, gnl\|Hg17\|chr6 (144334688-144335356)
	12-681, gnl\|Mm7\|chr10 (12809907-12809237)