Non-Coding RNA Search

unkn-MI-P-NA-aes-b-05-1-UM.s1

Sequence:


               
               TTTTTTTTTTTTTTTTTTAACTTGGGGACAAATGCATGGCAAGTACTGACAACACAATGG
TAGAATAGCTGGTTATCTAGCCTCAGTCTAATTCTATTGAGCACAATATCTAGTACACTA
GTGGACAATAGTGAGACCAAGGCAAGTTTACACTATACCTAGCACATACCAGTCATGCAA
TGGCCCCTATAAGGCTCATGCCACCAGGCAGTAGCAGATATTCAAGCCATTAAGTAATCA
TCCACAGCATGCATTAAAAGTTTCATTAAAAGAACACCAAAGAAGAAACAACTAATGATT
TTATTCACTCTTTTAAAAACTCCAGAACCCTCTCTTGAGCTTATACATTCTGAAATGGAT
TATCAAGGTCTCAGTGTAAGTCCTCTCCCTCAGAGCAGAGGTATCTCTACTTAAAAAAAG
AAAAAAACTTGTCCAGCATTCAAGTAAACGTTATTCAATATTACCAAATATATGTATATA
TATATATGCGCAAAGATGCACACAATTTAAGTACACAATTTGATGTGTGTAAAAAGCGTA
TCTAAAAAAACAAAAGCATAGATGAGAACATTATATACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTAACTTGGGGACAAATGCATGGCAAGTACTGACAACACAATGG
TAGAATAGCTGGTTATCTAGCCTCAGTCTAATTCTATTGAGCACAATATCTAGTACACTA
GTGGACAATAGTGAGACCAAGGCAAGTTTACACTATACCTAGCACATACCAGTCATGCAA
TGGCCCCTATAAGGCTCATGCCACCAGGCAGTAGCAGATATTCAAGCCATTAAGTAATCA
TCCACAGCATGCATTAAAAGTTTCATTAAAAGAACACCAAAGAAGAAACAACTAATGATT
TTATTCACTCTTTTAAAAACTCCAGAACCCTCTCTTGAGCTTATACATTCTGAAATGGAT
TATCAAGGTCTCAGTGTAAGTCCTCTCCCTCAGAGCAGAGGTATCTCTACTTAAAAAAAG
AAAAAAACTTGTCCAGCATTCAAGTAAACGTTATTCAATATTACCAAATATATGTATATA
TATATATGCGCAAAGATGCACACAATTTAAGTACACAATTTGATGTGTGTAAAAAGCGTA
TCTAAAAAAACAAAAGCATAGATGAGAACATTATATACA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               456-577, - strand, RNAz p=0.783222

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               456-577, - strand, RNAz p=0.783222

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-577, gnl|bosTau2|chr2 (17814213-17813656)
               

               
               1-577, gnl|Hg17|chr2 (172533210-172534399)
               

               
               1-577, gnl|Mm7|chr2 (71173547-71174117)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-577, gnl|bosTau2|chr2 (17814213-17813656)
               

               
               1-577, gnl|Hg17|chr2 (172533210-172534399)
               

               
               1-577, gnl|Mm7|chr2 (71173547-71174117)

	1-577, gnl\|bosTau2\|chr2 (17814213-17813656)
	1-577, gnl\|Hg17\|chr2 (172533210-172534399)
	1-577, gnl\|Mm7\|chr2 (71173547-71174117)