Non-Coding RNA Search

unkn-MI-P-NA-aes-d-11-1-UM.s1

Sequence:


               
               TTTTTTTTTTTTTTTTTTCAGAGCACAAACCCAGAGAGAAACTTTAATATACAGGAAACG
CTGGGGTAGCAAATATGGTTGTAATTCTGGGAATTGCAACAATTACTTGTGTTTTTTCCT
AAAAAAGCACAGGGAAGAAAAACAAACAAACAAACAAAACCCAAGAACCAGCCATTAAGA
TGATAAAATTATTTTCCTCAAACACCACTCAAGCCCACTCTACAATACACGCCTGATACT
CTGCTTAACATGCAGCAGGCAAAAGCACTCATGTTGAATAGGACAAATGTATAGAAAGTA
CGCACAGTTCTTAGTCTGAGGCTTAACAAAGAGGGCAAGCATTCTTTCACATGCACCATC
CCTGGGAGGAAGTCCAAAGGGCAGATAATCAGCCAGATGCCCAAAGTATGTCCATGTGGT
TATTCATCCAAGGTGTCCCACTGCTGGGCCACAGGGGTACCTCAGTGGTCATTANCAGCA
ACCCTGAATGTTGTCAGAGCTGGAGAATGAGTTCTGCTCCCCAACTCAAGCTCCTGGTAT
AGGGCCTGGCCGAGCGCGAAGGGGTTCGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTCAGAGCACAAACCCAGAGAGAAACTTTAATATACAGGAAACG
CTGGGGTAGCAAATATGGTTGTAATTCTGGGAATTGCAACAATTACTTGTGTTTTTTCCT
AAAAAAGCACAGGGAAGAAAAACAAACAAACAAACAAAACCCAAGAACCAGCCATTAAGA
TGATAAAATTATTTTCCTCAAACACCACTCAAGCCCACTCTACAATACACGCCTGATACT
CTGCTTAACATGCAGCAGGCAAAAGCACTCATGTTGAATAGGACAAATGTATAGAAAGTA
CGCACAGTTCTTAGTCTGAGGCTTAACAAAGAGGGCAAGCATTCTTTCACATGCACCATC
CCTGGGAGGAAGTCCAAAGGGCAGATAATCAGCCAGATGCCCAAAGTATGTCCATGTGGT
TATTCATCCAAGGTGTCCCACTGCTGGGCCACAGGGGTACCTCAGTGGTCATTANCAGCA
ACCCTGAATGTTGTCAGAGCTGGAGAATGAGTTCTGCTCCCCAACTCAAGCTCCTGGTAT
AGGGCCTGGCCGAGCGCGAAGGGGTTCGAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               416-555, - strand, RNAz p=0.997498

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               416-555, - strand, RNAz p=0.997498

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               18-555, gnl|bosTau2|chr5 (33744043-33743487)
               

               
               18-555, gnl|Hg17|chr9 (33051460-33051990)
               

               
               18-555, gnl|Mm7|chr4 (40889755-40890311)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-555, gnl|bosTau2|chr5 (33744043-33743487)
               

               
               18-555, gnl|Hg17|chr9 (33051460-33051990)
               

               
               18-555, gnl|Mm7|chr4 (40889755-40890311)

	18-555, gnl\|bosTau2\|chr5 (33744043-33743487)
	18-555, gnl\|Hg17\|chr9 (33051460-33051990)
	18-555, gnl\|Mm7\|chr4 (40889755-40890311)