Non-Coding RNA Search

unkn-MI-P-NA-aes-f-07-1-UM.s1

Sequence:


               
               TTTTTTTTTTTTTTTTTTACTGGAGGACATAGCCATCTATTAAAACTGGCTCTACCACTA
ATATTTGCAGACTGGGGACCAAGCAACCCNTGGAGACAAATTGGAAAACTGTCCAAATGA
AATTTCAGCGACTCCCATAATCTGATGTATCATGAATGCCACAACCCCTGCAGCAGTCCA
AATTCGCTGCTAAGAGCCAGGAGCCCACTTAGTGGGACAAAATCCAAAAACGAATTTAAT
AGAGTTTAAAGTCTGGTTCCCCCTTCCTCCAAATCCCCATCCCCTCCCTCCTCATATTAG
AAGAAGTTACCTGGACCTTGTGATGCTTTCTGCTATGTAAAATGTCTGGTATACCATCTT
TGGCAGAGTCAAGGGGGTTGGGGAGGTTTGCGTTTCTGAACGAAGGCGAATCACTGCACC
CACAATGCTGCACATAGACTCACATAAGTGCTGGACATCTACCATAGTCCTTCGAAACAT
GCCGAGACAGGGTGAAGCCCTCAGAGAGTCCAGGGCACCACCAGCCACTGCGTTGTGACA
CATGGTTTTTAAAGCATTATTTACACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTACTGGAGGACATAGCCATCTATTAAAACTGGCTCTACCACTA
ATATTTGCAGACTGGGGACCAAGCAACCCNTGGAGACAAATTGGAAAACTGTCCAAATGA
AATTTCAGCGACTCCCATAATCTGATGTATCATGAATGCCACAACCCCTGCAGCAGTCCA
AATTCGCTGCTAAGAGCCAGGAGCCCACTTAGTGGGACAAAATCCAAAAACGAATTTAAT
AGAGTTTAAAGTCTGGTTCCCCCTTCCTCCAAATCCCCATCCCCTCCCTCCTCATATTAG
AAGAAGTTACCTGGACCTTGTGATGCTTTCTGCTATGTAAAATGTCTGGTATACCATCTT
TGGCAGAGTCAAGGGGGTTGGGGAGGTTTGCGTTTCTGAACGAAGGCGAATCACTGCACC
CACAATGCTGCACATAGACTCACATAAGTGCTGGACATCTACCATAGTCCTTCGAAACAT
GCCGAGACAGGGTGAAGCCCTCAGAGAGTCCAGGGCACCACCAGCCACTGCGTTGTGACA
CATGGTTTTTAAAGCATTATTTACACAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               270-385, - strand, RNAz p=0.980664

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               270-385, - strand, RNAz p=0.980664

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               4-568, gnl|bosTau2|chr13 (1752700-1753262)
               

               
               4-568, gnl|canFam2|chr24 (15011836-15011145)
               

               
               4-568, gnl|dasNov1|scaffold_98 (139443-138763)
               

               
               4-568, gnl|echTel1|scaffold_319916 (37717-36958)
               

               
               4-568, gnl|hg17|chr20 (10223477-10224180)
               

               
               4-568, gnl|Hg17|chr20 (10224315-10223749)
               

               
               4-568, gnl|loxAfr1|scaffold_700 (156866-157553)
               

               
               4-568, gnl|mm7|chr2 (136512541-136513197)
               

               
               4-568, gnl|Mm7|chr2 (136513327-136512789)
               

               
               4-568, gnl|monDom2|scaffold_1 (42474808-42475520)
               

               
               4-568, gnl|oryCun1|scaffold_202760 (16955-16271)
               

               
               4-568, gnl|panTro1|chr21 (10089460-10090164)
               

               
               4-568, gnl|rheMac2|chr10 (43568941-43569635)
               

               
               4-568, gnl|rn3|chr3 (124789721-124790385)

Aligned organism(s): 14 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-568, gnl|bosTau2|chr13 (1752700-1753262)
               

               
               4-568, gnl|canFam2|chr24 (15011836-15011145)
               

               
               4-568, gnl|dasNov1|scaffold_98 (139443-138763)
               

               
               4-568, gnl|echTel1|scaffold_319916 (37717-36958)
               

               
               4-568, gnl|hg17|chr20 (10223477-10224180)
               

               
               4-568, gnl|Hg17|chr20 (10224315-10223749)
               

               
               4-568, gnl|loxAfr1|scaffold_700 (156866-157553)
               

               
               4-568, gnl|mm7|chr2 (136512541-136513197)
               

               
               4-568, gnl|Mm7|chr2 (136513327-136512789)
               

               
               4-568, gnl|monDom2|scaffold_1 (42474808-42475520)
               

               
               4-568, gnl|oryCun1|scaffold_202760 (16955-16271)
               

               
               4-568, gnl|panTro1|chr21 (10089460-10090164)
               

               
               4-568, gnl|rheMac2|chr10 (43568941-43569635)
               

               
               4-568, gnl|rn3|chr3 (124789721-124790385)

	4-568, gnl\|bosTau2\|chr13 (1752700-1753262)
	4-568, gnl\|canFam2\|chr24 (15011836-15011145)
	4-568, gnl\|dasNov1\|scaffold_98 (139443-138763)
	4-568, gnl\|echTel1\|scaffold_319916 (37717-36958)
	4-568, gnl\|hg17\|chr20 (10223477-10224180)
	4-568, gnl\|Hg17\|chr20 (10224315-10223749)
	4-568, gnl\|loxAfr1\|scaffold_700 (156866-157553)
	4-568, gnl\|mm7\|chr2 (136512541-136513197)
	4-568, gnl\|Mm7\|chr2 (136513327-136512789)
	4-568, gnl\|monDom2\|scaffold_1 (42474808-42475520)
	4-568, gnl\|oryCun1\|scaffold_202760 (16955-16271)
	4-568, gnl\|panTro1\|chr21 (10089460-10090164)
	4-568, gnl\|rheMac2\|chr10 (43568941-43569635)
	4-568, gnl\|rn3\|chr3 (124789721-124790385)