unkn-MI-P-O2-abs-d-05-1-UM.s1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATACACCTTAAAGGAATTCACAATACAATGAAAGATTAAATCAAGGCCTCAGAATTTCAT ACAAACACCAAGACCAGAATCCTAAAGTATTGGTATTGCGTCTCAAATTTTCCCCATCAA CTTAAAAAAAAAAGCTTAAACTTACGTGCCTTAGAGGTTATTAAATGAAAACTAGAATTA ACAAACATGCCAAATGTTTCACTTTGAATTGTAGACACAGCTCCTACATTTTTACAAAAA AGCATGTCTTTCAACATGCACTCAGTGTTCAATGTAAGGTGGTAGAAGAGCAACATTTAA CAGAATTCAACTGCGTTAACCGAAATACACTTACGGCGTAAGTACATCCTACAATACAAC CGAAGGGGTTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATACACCTTAAAGGAATTCACAATACAATGAAAGATTAAATCAAGGCCTCAGAATTTCAT ACAAACACCAAGACCAGAATCCTAAAGTATTGGTATTGCGTCTCAAATTTTCCCCATCAA CTTAAAAAAAAAAGCTTAAACTTACGTGCCTTAGAGGTTATTAAATGAAAACTAGAATTA ACAAACATGCCAAATGTTTCACTTTGAATTGTAGACACAGCTCCTACATTTTTACAAAAA AGCATGTCTTTCAACATGCACTCAGTGTTCAATGTAAGGTGGTAGAAGAGCAACATTTAA CAGAATTCAACTGCGTTAACCGAAATACACTTACGGCGTAAGTACATCCTACAATACAAC CGAAGGGGTTC |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 1-114, - strand, RNAz p=0.560768 | |
| 239-343, - strand, RNAz p=0.916427 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-114, - strand, RNAz p=0.560768 | |
| 239-343, - strand, RNAz p=0.916427 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC001348, - |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 1-360, gnl|bosTau2|chr7 (281395-281765) | |
| 1-360, gnl|canFam2|chr11 (5062647-5063285) | |
| 1-360, gnl|canFam2|chr28 (6669855-6670342) | |
| 1-360, gnl|dasNov1|scaffold_83510 (4061-4691) | |
| 1-360, gnl|dasNov1|scaffold_83510 (4164-4701) | |
| 1-360, gnl|echTel1|scaffold_322700 (50317-50921) | |
| 1-360, gnl|echTel1|scaffold_322700 (50404-50919) | |
| 1-360, gnl|galGal2|chr13 (12519579-12520238) | |
| 1-360, gnl|galGal2|chr13 (12519684-12520235) | |
| 1-360, gnl|hg17|chr1 (209151505-209152165) | |
| 1-360, gnl|hg17|chr10 (71781650-71782185) | |
| 1-360, gnl|Hg17|chr5 (178973832-178974201) | |
| 1-360, gnl|loxAfr1|scaffold_25368 (5861-6509) | |
| 1-360, gnl|loxAfr1|scaffold_25368 (5986-6507) | |
| 1-360, gnl|mm7|chr11 (50342651-50343288) | |
| 1-360, gnl|mm7|chr11 (50342764-50343287) | |
| 1-360, gnl|Mm7|chr11 (50343240-50342879) | |
| 1-360, gnl|monDom2|scaffold_6 (56505949-56505292) | |
| 1-360, gnl|monDom2|scaffold_6 (56505841-56505281) | |
| 1-360, gnl|oryCun1|scaffold_87402 (460-1100) | |
| 1-360, gnl|oryCun1|scaffold_87402 (574-1099) | |
| 1-360, gnl|panTro1|chr1 (192791477-192792134) | |
| 1-360, gnl|panTro1|chr8_random (38533891-38533355) | |
| 1-360, gnl|rheMac2|chr6 (176246861-176246187) | |
| 1-360, gnl|rheMac2|chr9 (66657785-66657260) | |
| 1-360, gnl|rn3|chr10 (35930543-35931184) | |
| 1-360, gnl|rn3|chr10 (35930654-35931183) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-360, gnl|bosTau2|chr7 (281395-281765) | |
| 1-360, gnl|canFam2|chr11 (5062647-5063285) | |
| 1-360, gnl|canFam2|chr28 (6669855-6670342) | |
| 1-360, gnl|dasNov1|scaffold_83510 (4061-4691) | |
| 1-360, gnl|dasNov1|scaffold_83510 (4164-4701) | |
| 1-360, gnl|echTel1|scaffold_322700 (50317-50921) | |
| 1-360, gnl|echTel1|scaffold_322700 (50404-50919) | |
| 1-360, gnl|galGal2|chr13 (12519579-12520238) | |
| 1-360, gnl|galGal2|chr13 (12519684-12520235) | |
| 1-360, gnl|hg17|chr1 (209151505-209152165) | |
| 1-360, gnl|hg17|chr10 (71781650-71782185) | |
| 1-360, gnl|Hg17|chr5 (178973832-178974201) | |
| 1-360, gnl|loxAfr1|scaffold_25368 (5861-6509) | |
| 1-360, gnl|loxAfr1|scaffold_25368 (5986-6507) | |
| 1-360, gnl|mm7|chr11 (50342651-50343288) | |
| 1-360, gnl|mm7|chr11 (50342764-50343287) | |
| 1-360, gnl|Mm7|chr11 (50343240-50342879) | |
| 1-360, gnl|monDom2|scaffold_6 (56505949-56505292) | |
| 1-360, gnl|monDom2|scaffold_6 (56505841-56505281) | |
| 1-360, gnl|oryCun1|scaffold_87402 (460-1100) | |
| 1-360, gnl|oryCun1|scaffold_87402 (574-1099) | |
| 1-360, gnl|panTro1|chr1 (192791477-192792134) | |
| 1-360, gnl|panTro1|chr8_random (38533891-38533355) | |
| 1-360, gnl|rheMac2|chr6 (176246861-176246187) | |
| 1-360, gnl|rheMac2|chr9 (66657785-66657260) | |
| 1-360, gnl|rn3|chr10 (35930543-35931184) | |
| 1-360, gnl|rn3|chr10 (35930654-35931183) |