Non-Coding RNA Search

unkn-P1

Sequence:


               
               TGGTAGAGAAGGAAGCCTGTGAAGATGGAGTCATTGACATTGTCAGCATAGACCCCATTA
TTCTCTTCATCCCCGTATGCCTGGAGCCAGACTTGGTCCCCCTTCTCCAGATAGAGGAGC
ACAGAGCCAGAGGCCTGGTCCACATTCTTGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTAGAGAAGGAAGCCTGTGAAGATGGAGTCATTGACATTGTCAGCATAGACCCCATTA
TTCTCTTCATCCCCGTATGCCTGGAGCCAGACTTGGTCCCCCTTCTCCAGATAGAGGAGC
ACAGAGCCAGAGGCCTGGTCCACATTCTTGTCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               1-153, - strand, RNAz p=0.58873

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-153, - strand, RNAz p=0.58873

Aligned organism(s): 19 entry(ies)

More info

Aligned organism(s): 19 entry(ies)

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               1-153, gnl|bosTau2|chr1 (49583112-49582960)
               

               
               1-153, gnl|canFam2|chr34 (22416460-22416791)
               

               
               1-153, gnl|danRer3|chr24 (25240339-25240670)
               

               
               1-153, gnl|dasNov1|scaffold_237594 (374-41)
               

               
               1-153, gnl|echTel1|scaffold_90884 (844-1175)
               

               
               1-153, gnl|fr1|chrUn (57840751-57841076)
               

               
               1-153, gnl|galGal2|chr9 (8394754-8395085)
               

               
               1-153, gnl|hg17|chr3 (188054846-188055177)
               

               
               1-153, gnl|Hg17|chr3 (188055182-188055030)
               

               
               1-153, gnl|loxAfr1|scaffold_22044 (43607-43943)
               

               
               1-153, gnl|mm7|chr16 (22815867-22816198)
               

               
               1-153, gnl|Mm7|chr16 (22816203-22816051)
               

               
               1-153, gnl|monDom2|scaffold_77 (1251919-1252250)
               

               
               1-153, gnl|oryCun1|scaffold_172870 (58391-58722)
               

               
               1-153, gnl|panTro1|chr2 (192145588-192145919)
               

               
               1-153, gnl|rheMac2|chr2 (179207701-179208032)
               

               
               1-153, gnl|rn3|chr11 (79966391-79966060)
               

               
               1-153, gnl|tetNig1|chrUn_random (96486805-96487130)
               

               
               1-153, gnl|xenTro1|scaffold_108 (1990204-1990535)

Aligned organism(s): 19 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-153, gnl|bosTau2|chr1 (49583112-49582960)
               

               
               1-153, gnl|canFam2|chr34 (22416460-22416791)
               

               
               1-153, gnl|danRer3|chr24 (25240339-25240670)
               

               
               1-153, gnl|dasNov1|scaffold_237594 (374-41)
               

               
               1-153, gnl|echTel1|scaffold_90884 (844-1175)
               

               
               1-153, gnl|fr1|chrUn (57840751-57841076)
               

               
               1-153, gnl|galGal2|chr9 (8394754-8395085)
               

               
               1-153, gnl|hg17|chr3 (188054846-188055177)
               

               
               1-153, gnl|Hg17|chr3 (188055182-188055030)
               

               
               1-153, gnl|loxAfr1|scaffold_22044 (43607-43943)
               

               
               1-153, gnl|mm7|chr16 (22815867-22816198)
               

               
               1-153, gnl|Mm7|chr16 (22816203-22816051)
               

               
               1-153, gnl|monDom2|scaffold_77 (1251919-1252250)
               

               
               1-153, gnl|oryCun1|scaffold_172870 (58391-58722)
               

               
               1-153, gnl|panTro1|chr2 (192145588-192145919)
               

               
               1-153, gnl|rheMac2|chr2 (179207701-179208032)
               

               
               1-153, gnl|rn3|chr11 (79966391-79966060)
               

               
               1-153, gnl|tetNig1|chrUn_random (96486805-96487130)
               

               
               1-153, gnl|xenTro1|scaffold_108 (1990204-1990535)

	1-153, gnl\|bosTau2\|chr1 (49583112-49582960)
	1-153, gnl\|canFam2\|chr34 (22416460-22416791)
	1-153, gnl\|danRer3\|chr24 (25240339-25240670)
	1-153, gnl\|dasNov1\|scaffold_237594 (374-41)
	1-153, gnl\|echTel1\|scaffold_90884 (844-1175)
	1-153, gnl\|fr1\|chrUn (57840751-57841076)
	1-153, gnl\|galGal2\|chr9 (8394754-8395085)
	1-153, gnl\|hg17\|chr3 (188054846-188055177)
	1-153, gnl\|Hg17\|chr3 (188055182-188055030)
	1-153, gnl\|loxAfr1\|scaffold_22044 (43607-43943)
	1-153, gnl\|mm7\|chr16 (22815867-22816198)
	1-153, gnl\|Mm7\|chr16 (22816203-22816051)
	1-153, gnl\|monDom2\|scaffold_77 (1251919-1252250)
	1-153, gnl\|oryCun1\|scaffold_172870 (58391-58722)
	1-153, gnl\|panTro1\|chr2 (192145588-192145919)
	1-153, gnl\|rheMac2\|chr2 (179207701-179208032)
	1-153, gnl\|rn3\|chr11 (79966391-79966060)
	1-153, gnl\|tetNig1\|chrUn_random (96486805-96487130)
	1-153, gnl\|xenTro1\|scaffold_108 (1990204-1990535)