unkn-PIGEST13A
|
GAATTCCCTTCTTCTCTAAACTTTCCTGTTTTCGTCCCTGATAACTGTTTTTTTGGAGCC
TCGGAACCTTGAAAATATTTTTGACTGTTCCTGCTCTTTTATCTTCTGTACTCACATAAG
CCCGCCCAACCAGGACCCCACCCTGGACTATCAAACCCAATTATACACTCACGGTCCACA
CGGAGCTCTGCTTTGGTGGAGGACACACCCACGCTGTTCTCAGGCAGGCAGCGGTAGACA
CCCATGTCTGTCGGCACCACAGCTGTGATGATGAGCTGATGGCCGCCCTGCTGGTCCTCA
CTGATCATATAGTGGTCATCTTCCTCCAGGACCCTCCCATCCTTGAACCAGGGCACACTG
GGCACAGGCTGGTCTGTCAACACACAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAATTCCCTTCTTCTCTAAACTTTCCTGTTTTCGTCCCTGATAACTGTTTTTTTGGAGCC
TCGGAACCTTGAAAATATTTTTGACTGTTCCTGCTCTTTTATCTTCTGTACTCACATAAG
CCCGCCCAACCAGGACCCCACCCTGGACTATCAAACCCAATTATACACTCACGGTCCACA
CGGAGCTCTGCTTTGGTGGAGGACACACCCACGCTGTTCTCAGGCAGGCAGCGGTAGACA
CCCATGTCTGTCGGCACCACAGCTGTGATGATGAGCTGATGGCCGCCCTGCTGGTCCTCA
CTGATCATATAGTGGTCATCTTCCTCCAGGACCCTCCCATCCTTGAACCAGGGCACACTG
GGCACAGGCTGGTCTGTCAACACACAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
137-387, gnl|bosTau2|chr7 (838108-837858) |
|
137-387, gnl|canFam2|chr14 (3649544-3649249) |
|
137-387, gnl|danRer3|chr24 (30157903-30157614) |
|
137-387, gnl|dasNov1|scaffold_109587 (2486-2785) |
|
137-387, gnl|echTel1|scaffold_181529 (3148-2850) |
|
137-387, gnl|fr1|chrUn (126312779-126313065) |
|
137-387, gnl|galGal2|chr2 (1697840-1697534) |
|
137-387, gnl|hg17|chr1 (224817754-224818054) |
|
137-387, gnl|Hg17|chr1 (224818079-224817828) |
|
137-387, gnl|loxAfr1|scaffold_62385 (6813-6514) |
|
137-387, gnl|mm7|chr11 (59119370-59119071) |
|
137-387, gnl|Mm7|chr11 (59119072-59119294) |
|
137-387, gnl|monDom2|scaffold_5 (78849539-78849246) |
|
137-387, gnl|oryCun1|scaffold_185602 (6873-7168) |
|
137-387, gnl|panTro1|chr1 (208610426-208610726) |
|
137-387, gnl|rheMac2|chr1 (142059767-142059467) |
|
137-387, gnl|rn3|chr10 (45341244-45340945) |
|
137-387, gnl|tetNig1|chr15_random (1001412-1001699) |
|
137-387, gnl|xenTro1|scaffold_451 (595283-595583) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
137-387, gnl|bosTau2|chr7 (838108-837858) |
|
137-387, gnl|canFam2|chr14 (3649544-3649249) |
|
137-387, gnl|danRer3|chr24 (30157903-30157614) |
|
137-387, gnl|dasNov1|scaffold_109587 (2486-2785) |
|
137-387, gnl|echTel1|scaffold_181529 (3148-2850) |
|
137-387, gnl|fr1|chrUn (126312779-126313065) |
|
137-387, gnl|galGal2|chr2 (1697840-1697534) |
|
137-387, gnl|hg17|chr1 (224817754-224818054) |
|
137-387, gnl|Hg17|chr1 (224818079-224817828) |
|
137-387, gnl|loxAfr1|scaffold_62385 (6813-6514) |
|
137-387, gnl|mm7|chr11 (59119370-59119071) |
|
137-387, gnl|Mm7|chr11 (59119072-59119294) |
|
137-387, gnl|monDom2|scaffold_5 (78849539-78849246) |
|
137-387, gnl|oryCun1|scaffold_185602 (6873-7168) |
|
137-387, gnl|panTro1|chr1 (208610426-208610726) |
|
137-387, gnl|rheMac2|chr1 (142059767-142059467) |
|
137-387, gnl|rn3|chr10 (45341244-45340945) |
|
137-387, gnl|tetNig1|chr15_random (1001412-1001699) |
|
137-387, gnl|xenTro1|scaffold_451 (595283-595583) |
