unkn-PS24U-139
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TACCACTGTTTTAGCTGGCTTCTGCTGACTTTTAAACATATCTTCTAGAGAAGTCTAGAG TCACTTTCCAGCTAAAGGCAGAAAGAAGCTACCACATTTTTTATCAGATCATGTCTAACA AGAAGCCAGAGCTCATTGAAATGCTCCTGATCACCACCAACCCATATGACTACGCCTTCG TCAGTCAAGGGGAGATCACTGTCCCCAGCATTGATGACCAAGAGGAGCTGATGGCCACAG ATAGTGCCATTGAAATCCTGGGCTTCACTTCTGATGAAAGGGTGTCCATCTACAAGCTCA CAGGGGCGGTAATGCACTATGGAAACTTGAAATTCAAGCAAAAGCAACCGCGAGGAGCAA AGCAGAGCCAGATGGCACAGAAGTTGCTGACAAGGCTGCCTACCTCCAGGGTCTGAACTC TGCTGACCTGCTCAAAGCCCTCTGCTACCCCAGGGTCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TACCACTGTTTTAGCTGGCTTCTGCTGACTTTTAAACATATCTTCTAGAGAAGTCTAGAG TCACTTTCCAGCTAAAGGCAGAAAGAAGCTACCACATTTTTTATCAGATCATGTCTAACA AGAAGCCAGAGCTCATTGAAATGCTCCTGATCACCACCAACCCATATGACTACGCCTTCG TCAGTCAAGGGGAGATCACTGTCCCCAGCATTGATGACCAAGAGGAGCTGATGGCCACAG ATAGTGCCATTGAAATCCTGGGCTTCACTTCTGATGAAAGGGTGTCCATCTACAAGCTCA CAGGGGCGGTAATGCACTATGGAAACTTGAAATTCAAGCAAAAGCAACCGCGAGGAGCAA AGCAGAGCCAGATGGCACAGAAGTTGCTGACAAGGCTGCCTACCTCCAGGGTCTGAACTC TGCTGACCTGCTCAAAGCCCTCTGCTACCCCAGGGTCAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 265-383, + strand, RNAz p=0.558503 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 265-383, + strand, RNAz p=0.558503 |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 243-383, gnl|bosTau2|chr19 (2430795-2430657) | |
| 243-383, gnl|canFam2|chr5 (37795325-37795468) | |
| 243-383, gnl|canFam2|chr5 (37755118-37755276) | |
| 243-383, gnl|danRer3|chr5 (27667029-27666882) | |
| 243-383, gnl|danRer3|chr5 (27929276-27929113) | |
| 243-383, gnl|dasNov1|scaffold_2441 (13680-13532) | |
| 243-383, gnl|dasNov1|scaffold_2441 (55884-55727) | |
| 243-383, gnl|echTel1|scaffold_310399 (4851-4999) | |
| 243-383, gnl|echTel1|scaffold_323511 (1271-1426) | |
| 243-383, gnl|fr1|chrUn (258632120-258632271) | |
| 243-383, gnl|fr1|chrUn (258632129-258632272) | |
| 243-383, gnl|galGal2|chr18 (428291-428439) | |
| 243-383, gnl|galGal2|chr18 (380324-380465) | |
| 243-383, gnl|hg17|chr17 (10356443-10356591) | |
| 243-383, gnl|hg17|chr17 (10304956-10305114) | |
| 243-383, gnl|Hg17|chr17 (10356588-10356450) | |
| 243-383, gnl|loxAfr1|scaffold_121 (100591-100434) | |
| 243-383, gnl|loxAfr1|scaffold_44484 (12640-12492) | |
| 243-383, gnl|mm7|chr11 (67287626-67287478) | |
| 243-383, gnl|mm7|chr11 (67326305-67326147) | |
| 243-383, gnl|Mm7|chr11 (67287479-67287617) | |
| 243-383, gnl|monDom2|scaffold_18 (2987815-2987667) | |
| 243-383, gnl|monDom2|scaffold_18 (3041482-3041325) | |
| 243-383, gnl|oryCun1|scaffold_207117 (96375-96227) | |
| 243-383, gnl|oryCun1|scaffold_207117 (126923-126765) | |
| 243-383, gnl|panTro1|chr19_random (28063616-28063468) | |
| 243-383, gnl|panTro1|chr19_random (28114817-28114659) | |
| 243-383, gnl|rheMac2|chr16 (10269352-10269500) | |
| 243-383, gnl|rheMac2|chr16 (10217343-10217500) | |
| 243-383, gnl|rn3|chr10 (53913679-53913531) | |
| 243-383, gnl|rn3|chr10 (53952386-53952228) | |
| 243-383, gnl|tetNig1|chrUn_random (96678861-96678716) | |
| 243-383, gnl|tetNig1|chrUn_random (96678858-96678715) | |
| 243-383, gnl|xenTro1|scaffold_270 (145387-145239) | |
| 243-383, gnl|xenTro1|scaffold_270 (117231-117084) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 243-383, gnl|bosTau2|chr19 (2430795-2430657) | |
| 243-383, gnl|canFam2|chr5 (37795325-37795468) | |
| 243-383, gnl|canFam2|chr5 (37755118-37755276) | |
| 243-383, gnl|danRer3|chr5 (27667029-27666882) | |
| 243-383, gnl|danRer3|chr5 (27929276-27929113) | |
| 243-383, gnl|dasNov1|scaffold_2441 (13680-13532) | |
| 243-383, gnl|dasNov1|scaffold_2441 (55884-55727) | |
| 243-383, gnl|echTel1|scaffold_310399 (4851-4999) | |
| 243-383, gnl|echTel1|scaffold_323511 (1271-1426) | |
| 243-383, gnl|fr1|chrUn (258632120-258632271) | |
| 243-383, gnl|fr1|chrUn (258632129-258632272) | |
| 243-383, gnl|galGal2|chr18 (428291-428439) | |
| 243-383, gnl|galGal2|chr18 (380324-380465) | |
| 243-383, gnl|hg17|chr17 (10356443-10356591) | |
| 243-383, gnl|hg17|chr17 (10304956-10305114) | |
| 243-383, gnl|Hg17|chr17 (10356588-10356450) | |
| 243-383, gnl|loxAfr1|scaffold_121 (100591-100434) | |
| 243-383, gnl|loxAfr1|scaffold_44484 (12640-12492) | |
| 243-383, gnl|mm7|chr11 (67287626-67287478) | |
| 243-383, gnl|mm7|chr11 (67326305-67326147) | |
| 243-383, gnl|Mm7|chr11 (67287479-67287617) | |
| 243-383, gnl|monDom2|scaffold_18 (2987815-2987667) | |
| 243-383, gnl|monDom2|scaffold_18 (3041482-3041325) | |
| 243-383, gnl|oryCun1|scaffold_207117 (96375-96227) | |
| 243-383, gnl|oryCun1|scaffold_207117 (126923-126765) | |
| 243-383, gnl|panTro1|chr19_random (28063616-28063468) | |
| 243-383, gnl|panTro1|chr19_random (28114817-28114659) | |
| 243-383, gnl|rheMac2|chr16 (10269352-10269500) | |
| 243-383, gnl|rheMac2|chr16 (10217343-10217500) | |
| 243-383, gnl|rn3|chr10 (53913679-53913531) | |
| 243-383, gnl|rn3|chr10 (53952386-53952228) | |
| 243-383, gnl|tetNig1|chrUn_random (96678861-96678716) | |
| 243-383, gnl|tetNig1|chrUn_random (96678858-96678715) | |
| 243-383, gnl|xenTro1|scaffold_270 (145387-145239) | |
| 243-383, gnl|xenTro1|scaffold_270 (117231-117084) |