unkn-PS24U-9
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TACCATCCTCTTCGCTCCGGCGACATCTGCATATGCTGCCGCCATGACTGAACAGATGAC TCTCCGTGGCACCCTCAAGGGCCATAACGGCTGGGTGACCCAGATTGCTACCACTCCCCA GTTCCCGGACATGATACTGTCCGCTTCTCGAGACAAGACCATCATCATGTGGAAGCTGAC CAGAGATGAGACCAATTATGGAATCCCACAGCGTGCTCTTCGGGGTCACTCCCACTTTGT TAGTGACGTGGTCATCTCCTCAGATGGCCAGTTTGCCCTCTCGGGCTCCTGGGATGGAAC CCTTCGCCTCTGGGATCTCACAACGGGCACCACCACGCGCCGATTTGTAGGCCATACTAA GGGATGTGCTGGAGTGTGGCCTTCTCCTCTGACAACCGACAAAATTGTCTCTGGCTCCCG AGATAAAACCATCAAGCTATGGAATCTCTTGGGGTGTGTGCAAATACACTGGTCCAGGAT GAGACCCTTAAGGGGGTTTTTTGTGGTCCCGCTTTTTTCACCCCAACAGCAGCAATCCCC ATATTGTTTCCTGGGGTTGGGACAAGCTGGTCAAGGTATGGAACTTGGCTAACTGCAAGC TTAAAACCCATCACATCGGCCACACAGGCTACCTGAACACTGGTGACTGTCTCTCCAGAT GGATCCCTCTGTGCTTCTGAAGGCAAGGATGGCCGGGCCATGTTGTGGGACCTTAATGAA GGCAAGCACCTTTACACGCTAGATGGTGGGGATATCATCAATGCCCTGTGCTTCAGTCCC AATCGCTACTGGCTCTGTGCTGCTACAGGCCCTAGCATCAAGATCTGGGACTTGGAGGGC AAGATCATTGTAGATGAAATGAAGCAGGAAGTTATCAGTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TACCATCCTCTTCGCTCCGGCGACATCTGCATATGCTGCCGCCATGACTGAACAGATGAC TCTCCGTGGCACCCTCAAGGGCCATAACGGCTGGGTGACCCAGATTGCTACCACTCCCCA GTTCCCGGACATGATACTGTCCGCTTCTCGAGACAAGACCATCATCATGTGGAAGCTGAC CAGAGATGAGACCAATTATGGAATCCCACAGCGTGCTCTTCGGGGTCACTCCCACTTTGT TAGTGACGTGGTCATCTCCTCAGATGGCCAGTTTGCCCTCTCGGGCTCCTGGGATGGAAC CCTTCGCCTCTGGGATCTCACAACGGGCACCACCACGCGCCGATTTGTAGGCCATACTAA GGGATGTGCTGGAGTGTGGCCTTCTCCTCTGACAACCGACAAAATTGTCTCTGGCTCCCG AGATAAAACCATCAAGCTATGGAATCTCTTGGGGTGTGTGCAAATACACTGGTCCAGGAT GAGACCCTTAAGGGGGTTTTTTGTGGTCCCGCTTTTTTCACCCCAACAGCAGCAATCCCC ATATTGTTTCCTGGGGTTGGGACAAGCTGGTCAAGGTATGGAACTTGGCTAACTGCAAGC TTAAAACCCATCACATCGGCCACACAGGCTACCTGAACACTGGTGACTGTCTCTCCAGAT GGATCCCTCTGTGCTTCTGAAGGCAAGGATGGCCGGGCCATGTTGTGGGACCTTAATGAA GGCAAGCACCTTTACACGCTAGATGGTGGGGATATCATCAATGCCCTGTGCTTCAGTCCC AATCGCTACTGGCTCTGTGCTGCTACAGGCCCTAGCATCAAGATCTGGGACTTGGAGGGC AAGATCATTGTAGATGAAATGAAGCAGGAAGTTATCAGTA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 151-309, - strand, RNAz p=0.997591 | |
| 189-325, + strand, RNAz p=0.906314 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 151-309, - strand, RNAz p=0.997591 | |
| 189-325, + strand, RNAz p=0.906314 |
| Aligned organism(s): 55 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
| 151-325, gnl|bosTau2|chr7 (27011214-27011040) | |
| 151-325, gnl|canFam2|chr11 (3432098-3432268) | |
| 151-325, gnl|danRer3|chr14 (2921296-2921466) | |
| 151-325, gnl|dasNov1|scaffold_42207 (42757-42592) | |
| 151-325, gnl|echTel1|scaffold_5256 (700-867) | |
| 151-325, gnl|fr1|chrUn (114182527-114182697) | |
| 151-325, gnl|hg17|chr4 (94100979-94101149) | |
| 151-325, gnl|Hg17|chr5 (180601953-180601779) | |
| 151-325, gnl|loxAfr1|scaffold_52614 (14407-14577) | |
| 151-325, gnl|mm7|chr11 (48758586-48758417) | |
| 151-325, gnl|Mm7|chr11 (48758414-48758588) | |
| 151-325, gnl|monDom2|scaffold_43 (7042863-7042704) | |
| 151-325, gnl|oryCun1|scaffold_176834 (49061-49230) | |
| 151-325, gnl|panTro1|chr3 (110218770-110218940) | |
| 151-325, gnl|rheMac2|chr5 (85792580-85792750) | |
| 151-325, gnl|rn3|chr3 (133129006-133128858) | |
| 151-325, gnl|tetNig1|chr1 (917180-917010) | |
| 151-325, gnl|xenTro1|scaffold_105 (52347-52177) | |
| 574-688, gnl|bosTau2|chr7 (27009601-27009488) | |
| 574-688, gnl|canFam2|chr11 (3430570-3430677) | |
| 574-688, gnl|canFam2|chr11 (3430681-3430595) | |
| 574-688, gnl|danRer3|chrNA (139121656-139121555) | |
| 574-688, gnl|danRer3|chrNA (139121556-139121637) | |
| 574-688, gnl|dasNov1|scaffold_4767 (62917-63024) | |
| 574-688, gnl|dasNov1|scaffold_4767 (63028-62942) | |
| 574-688, gnl|echTel1|scaffold_5256 (348-454) | |
| 574-688, gnl|echTel1|scaffold_5256 (458-373) | |
| 574-688, gnl|fr1|chrUn (114181567-114181668) | |
| 574-688, gnl|fr1|chrUn (114181667-114181586) | |
| 574-688, gnl|galGal2|chr16 (136910-136824) | |
| 574-688, gnl|hg17|chr4 (94100626-94100733) | |
| 574-688, gnl|hg17|chr5 (108148728-108148814) | |
| 574-688, gnl|Hg17|chr5 (180598785-180598672) | |
| 574-688, gnl|loxAfr1|scaffold_79111 (5440-5545) | |
| 574-688, gnl|loxAfr1|scaffold_79111 (5549-5465) | |
| 574-688, gnl|mm7|chr11 (48760721-48760615) | |
| 574-688, gnl|mm7|chr11 (48760615-48760696) | |
| 574-688, gnl|Mm7|chr11 (48760610-48760722) | |
| 574-688, gnl|monDom2|scaffold_43 (7043215-7043109) | |
| 574-688, gnl|monDom2|scaffold_43 (7043105-7043190) | |
| 574-688, gnl|oryCun1|scaffold_176834 (47177-47284) | |
| 574-688, gnl|oryCun1|scaffold_176834 (47283-47202) | |
| 574-688, gnl|panTro1|chr3 (110218417-110218524) | |
| 574-688, gnl|panTro1|chr4 (114213572-114213658) | |
| 574-688, gnl|rheMac2|chr5 (85792230-85792337) | |
| 574-688, gnl|rheMac2|chr6 (105135009-105135095) | |
| 574-688, gnl|rn3|chr3 (133129358-133129252) | |
| 574-688, gnl|rn3|chr3 (133129248-133129333) | |
| 574-688, gnl|tetNig1|chr1 (918392-918294) | |
| 574-688, gnl|tetNig1|chr1 (918292-918373) | |
| 574-688, gnl|xenTro1|scaffold_105 (54258-54151) | |
| 574-688, gnl|xenTro1|scaffold_105 (54147-54233) | |
| 711-880, gnl|bosTau2|chr11 (76282636-76282802) | |
| 711-880, gnl|Hg17|chr5 (108148873-108149032) | |
| 711-880, gnl|Mm7|chr11 (48760933-48762349) |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 151-325, gnl|bosTau2|chr7 (27011214-27011040) | |
| 151-325, gnl|canFam2|chr11 (3432098-3432268) | |
| 151-325, gnl|danRer3|chr14 (2921296-2921466) | |
| 151-325, gnl|dasNov1|scaffold_42207 (42757-42592) | |
| 151-325, gnl|echTel1|scaffold_5256 (700-867) | |
| 151-325, gnl|fr1|chrUn (114182527-114182697) | |
| 151-325, gnl|hg17|chr4 (94100979-94101149) | |
| 151-325, gnl|Hg17|chr5 (180601953-180601779) | |
| 151-325, gnl|loxAfr1|scaffold_52614 (14407-14577) | |
| 151-325, gnl|mm7|chr11 (48758586-48758417) | |
| 151-325, gnl|Mm7|chr11 (48758414-48758588) | |
| 151-325, gnl|monDom2|scaffold_43 (7042863-7042704) | |
| 151-325, gnl|oryCun1|scaffold_176834 (49061-49230) | |
| 151-325, gnl|panTro1|chr3 (110218770-110218940) | |
| 151-325, gnl|rheMac2|chr5 (85792580-85792750) | |
| 151-325, gnl|rn3|chr3 (133129006-133128858) | |
| 151-325, gnl|tetNig1|chr1 (917180-917010) | |
| 151-325, gnl|xenTro1|scaffold_105 (52347-52177) | |
| 574-688, gnl|bosTau2|chr7 (27009601-27009488) | |
| 574-688, gnl|canFam2|chr11 (3430570-3430677) | |
| 574-688, gnl|canFam2|chr11 (3430681-3430595) | |
| 574-688, gnl|danRer3|chrNA (139121656-139121555) | |
| 574-688, gnl|danRer3|chrNA (139121556-139121637) | |
| 574-688, gnl|dasNov1|scaffold_4767 (62917-63024) | |
| 574-688, gnl|dasNov1|scaffold_4767 (63028-62942) | |
| 574-688, gnl|echTel1|scaffold_5256 (348-454) | |
| 574-688, gnl|echTel1|scaffold_5256 (458-373) | |
| 574-688, gnl|fr1|chrUn (114181567-114181668) | |
| 574-688, gnl|fr1|chrUn (114181667-114181586) | |
| 574-688, gnl|galGal2|chr16 (136910-136824) | |
| 574-688, gnl|hg17|chr4 (94100626-94100733) | |
| 574-688, gnl|hg17|chr5 (108148728-108148814) | |
| 574-688, gnl|Hg17|chr5 (180598785-180598672) | |
| 574-688, gnl|loxAfr1|scaffold_79111 (5440-5545) | |
| 574-688, gnl|loxAfr1|scaffold_79111 (5549-5465) | |
| 574-688, gnl|mm7|chr11 (48760721-48760615) | |
| 574-688, gnl|mm7|chr11 (48760615-48760696) | |
| 574-688, gnl|Mm7|chr11 (48760610-48760722) | |
| 574-688, gnl|monDom2|scaffold_43 (7043215-7043109) | |
| 574-688, gnl|monDom2|scaffold_43 (7043105-7043190) | |
| 574-688, gnl|oryCun1|scaffold_176834 (47177-47284) | |
| 574-688, gnl|oryCun1|scaffold_176834 (47283-47202) | |
| 574-688, gnl|panTro1|chr3 (110218417-110218524) | |
| 574-688, gnl|panTro1|chr4 (114213572-114213658) | |
| 574-688, gnl|rheMac2|chr5 (85792230-85792337) | |
| 574-688, gnl|rheMac2|chr6 (105135009-105135095) | |
| 574-688, gnl|rn3|chr3 (133129358-133129252) | |
| 574-688, gnl|rn3|chr3 (133129248-133129333) | |
| 574-688, gnl|tetNig1|chr1 (918392-918294) | |
| 574-688, gnl|tetNig1|chr1 (918292-918373) | |
| 574-688, gnl|xenTro1|scaffold_105 (54258-54151) | |
| 574-688, gnl|xenTro1|scaffold_105 (54147-54233) | |
| 711-880, gnl|bosTau2|chr11 (76282636-76282802) | |
| 711-880, gnl|Hg17|chr5 (108148873-108149032) | |
| 711-880, gnl|Mm7|chr11 (48760933-48762349) |