Non-Coding RNA Search

unkn-SGD602702216.R1

Sequence:


               
               TTTTTTTGGCTTACACCCTGGGTGTGAAACAAGGAATTGTTGGCGTTAACAAAATGGATT
CCACTGAGCCACCCTATAGCCAGAAGAGATACGAAGAAATTGTTAAGGAAGTCAGCACCT
ATATTAAGAAAATTGGCTACAACCCCGACACAGTAGCATTTGTGCCAATTTCTGGCTGGA
ATGGTGACAACATGCTAGAACCAAGTGCTAATATGCCATGGTTCAAGGGATGGAAAGTCA
CCCGTAAGGACGGCAATGCCAGTGGAACCACCCTGCTTGAAGCTCTGGATTGCATTCTGC
CACCAACTCGCCCAACTGACAAACCCTTGCGTTTGCCTCTCCAGGATGTCTATAAAATTG
GTGGTATTGGTACTGTCCCTGTGGGTCGTGTGGAGACTGGTGTTCTCAAACCTGGCATGG
TGGTCACCTTTGCTCCAGTCAATGTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTGGCTTACACCCTGGGTGTGAAACAAGGAATTGTTGGCGTTAACAAAATGGATT
CCACTGAGCCACCCTATAGCCAGAAGAGATACGAAGAAATTGTTAAGGAAGTCAGCACCT
ATATTAAGAAAATTGGCTACAACCCCGACACAGTAGCATTTGTGCCAATTTCTGGCTGGA
ATGGTGACAACATGCTAGAACCAAGTGCTAATATGCCATGGTTCAAGGGATGGAAAGTCA
CCCGTAAGGACGGCAATGCCAGTGGAACCACCCTGCTTGAAGCTCTGGATTGCATTCTGC
CACCAACTCGCCCAACTGACAAACCCTTGCGTTTGCCTCTCCAGGATGTCTATAAAATTG
GTGGTATTGGTACTGTCCCTGTGGGTCGTGTGGAGACTGGTGTTCTCAAACCTGGCATGG
TGGTCACCTTTGCTCCAGTCAATGTAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               123-282, + strand, RNAz p=0.98904

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               123-282, + strand, RNAz p=0.98904

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-420, gnl|bosTau2|chr9 (24248274-24247859)
               

               
               4-420, gnl|Hg17|chr9 (132924839-132925255)
               

               
               4-420, gnl|Mm7|chr2 (40563450-40563866)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-420, gnl|bosTau2|chr9 (24248274-24247859)
               

               
               4-420, gnl|Hg17|chr9 (132924839-132925255)
               

               
               4-420, gnl|Mm7|chr2 (40563450-40563866)

	4-420, gnl\|bosTau2\|chr9 (24248274-24247859)
	4-420, gnl\|Hg17\|chr9 (132924839-132925255)
	4-420, gnl\|Mm7\|chr2 (40563450-40563866)