unkn-SGD602702240.R1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTACCAGAACAGTCTTTATTATTATTGAGTTATATTTAAAAATTATTTGTGTAGT TAATTATATGCTGACTTGTAAATGAGTATTATACATGAACCCCCTTTCAGAGGCAAATCC TTGCTGTGCTATTGAACATCTAATTACATTGCAAAAAGTGTCCTTTTTTGCTATCAATAA AGAAAACAGTTAATGATACTACTGCAAGTATTAGGAAGGCTACAAAAAAAAGAAAGAAAG AACATTTCTTTTTTGTCTTCAAAGTGCTTTCCATGCAGTTAAGCACTTGCCTGGTTTAGC TGAATGCACCCTTGGGTCAAAGAGATGCTCTTGAATTAGAAGACTAGAAGGATTCATGCA ACCCTCTTGCTACTGGGACACCATTGTGTCACTCCCTCACCAATCCTGTCTTTCCAGAAT ACCATTCCAGACACTTCAAAAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTACCAGAACAGTCTTTATTATTATTGAGTTATATTTAAAAATTATTTGTGTAGT TAATTATATGCTGACTTGTAAATGAGTATTATACATGAACCCCCTTTCAGAGGCAAATCC TTGCTGTGCTATTGAACATCTAATTACATTGCAAAAAGTGTCCTTTTTTGCTATCAATAA AGAAAACAGTTAATGATACTACTGCAAGTATTAGGAAGGCTACAAAAAAAAGAAAGAAAG AACATTTCTTTTTTGTCTTCAAAGTGCTTTCCATGCAGTTAAGCACTTGCCTGGTTTAGC TGAATGCACCCTTGGGTCAAAGAGATGCTCTTGAATTAGAAGACTAGAAGGATTCATGCA ACCCTCTTGCTACTGGGACACCATTGTGTCACTCCCTCACCAATCCTGTCTTTCCAGAAT ACCATTCCAGACACTTCAAAAAG |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 168-347, + strand, RNAz p=0.997704 | |
| 184-319, - strand, RNAz p=0.946682 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 168-347, + strand, RNAz p=0.997704 | |
| 184-319, - strand, RNAz p=0.946682 |
| Aligned organism(s): 67 entry(ies) | More info |
| Aligned organism(s): 67 entry(ies) | Help | Less info |
| 10-443, gnl|bosTau2|chr13 (15341311-15340879) | |
| 10-443, gnl|canFam2|chr2 (26014366-26015161) | |
| 10-443, gnl|canFam2|chr2 (26014537-26014905) | |
| 10-443, gnl|canFam2|chr2 (26015090-26014584) | |
| 10-443, gnl|canFam2|chr2 (26014973-26014537) | |
| 10-443, gnl|canFam2|chr2 (26014433-26014886) | |
| 10-443, gnl|dasNov1|scaffold_215162 (1651-919) | |
| 10-443, gnl|dasNov1|scaffold_215162 (993-1481) | |
| 10-443, gnl|dasNov1|scaffold_215162 (1111-1489) | |
| 10-443, gnl|dasNov1|scaffold_53847 (5282-5615) | |
| 10-443, gnl|dasNov1|scaffold_53847 (5165-5596) | |
| 10-443, gnl|echTel1|scaffold_205217 (557-122) | |
| 10-443, gnl|echTel1|scaffold_284257 (37906-37084) | |
| 10-443, gnl|echTel1|scaffold_284257 (37727-37360) | |
| 10-443, gnl|echTel1|scaffold_284257 (37153-37680) | |
| 10-443, gnl|echTel1|scaffold_284257 (37292-37727) | |
| 10-443, gnl|galGal2|chrUn (18649517-18648727) | |
| 10-443, gnl|galGal2|chrUn (146557928-146558310) | |
| 10-443, gnl|galGal2|chrUn (146558504-146557977) | |
| 10-443, gnl|galGal2|chrUn (146558383-146557928) | |
| 10-443, gnl|galGal2|chrUn (146557830-146558291) | |
| 10-443, gnl|hg17|chr10 (13400279-13400698) | |
| 10-443, gnl|Hg17|chr10 (13400307-13400753) | |
| 10-443, gnl|hg17|chr17 (44969130-44969942) | |
| 10-443, gnl|hg17|chr2 (200351722-200352076) | |
| 10-443, gnl|hg17|chr2 (114732865-114733352) | |
| 10-443, gnl|hg17|chrX (72773628-72774065) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (72509-73321) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (72710-73066) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (73253-72757) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (73134-72710) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (72604-73051) | |
| 10-443, gnl|mm7|chr2 (4824348-4825115) | |
| 10-443, gnl|mm7|chr2 (4824511-4824859) | |
| 10-443, gnl|mm7|chr2 (4825040-4824558) | |
| 10-443, gnl|mm7|chr2 (4824927-4824511) | |
| 10-443, gnl|mm7|chr2 (4824414-4824840) | |
| 10-443, gnl|Mm7|chr2 (4824897-4824457) | |
| 10-443, gnl|monDom2|scaffold_30 (12300915-12300091) | |
| 10-443, gnl|monDom2|scaffold_30 (12300721-12300353) | |
| 10-443, gnl|monDom2|scaffold_30 (12300166-12300669) | |
| 10-443, gnl|monDom2|scaffold_30 (12300283-12300721) | |
| 10-443, gnl|monDom2|scaffold_30 (12300822-12300372) | |
| 10-443, gnl|oryCun1|scaffold_123381 (725-1525) | |
| 10-443, gnl|oryCun1|scaffold_123381 (1451-961) | |
| 10-443, gnl|oryCun1|scaffold_123381 (820-1251) | |
| 10-443, gnl|oryCun1|scaffold_213171 (108960-109368) | |
| 10-443, gnl|panTro1|chr13 (728166-728667) | |
| 10-443, gnl|panTro1|chr13_random (24621413-24621058) | |
| 10-443, gnl|panTro1|chr19_random (43862921-43863733) | |
| 10-443, gnl|panTro1|chr8 (13789908-13790327) | |
| 10-443, gnl|panTro1|chrX (75210656-75211094) | |
| 10-443, gnl|rheMac2|chr12 (63250528-63250898) | |
| 10-443, gnl|rheMac2|chr13 (120411765-120412260) | |
| 10-443, gnl|rheMac2|chr9 (13583467-13582628) | |
| 10-443, gnl|rheMac2|chr9 (13582822-13583267) | |
| 10-443, gnl|rheMac2|chrX (153009809-153009359) | |
| 10-443, gnl|rn3|chr17 (84457407-84456699) | |
| 10-443, gnl|rn3|chr17 (84457248-84456957) | |
| 10-443, gnl|rn3|chr17 (84456774-84457204) | |
| 10-443, gnl|rn3|chr17 (84456889-84457248) | |
| 10-443, gnl|rn3|chr17 (84457343-84456976) | |
| 10-443, gnl|xenTro1|scaffold_200 (435869-435034) | |
| 10-443, gnl|xenTro1|scaffold_200 (435675-435295) | |
| 10-443, gnl|xenTro1|scaffold_200 (435109-435637) | |
| 10-443, gnl|xenTro1|scaffold_200 (435222-435673) | |
| 10-443, gnl|xenTro1|scaffold_200 (435772-435310) |
| Aligned organism(s): 67 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 10-443, gnl|bosTau2|chr13 (15341311-15340879) | |
| 10-443, gnl|canFam2|chr2 (26014366-26015161) | |
| 10-443, gnl|canFam2|chr2 (26014537-26014905) | |
| 10-443, gnl|canFam2|chr2 (26015090-26014584) | |
| 10-443, gnl|canFam2|chr2 (26014973-26014537) | |
| 10-443, gnl|canFam2|chr2 (26014433-26014886) | |
| 10-443, gnl|dasNov1|scaffold_215162 (1651-919) | |
| 10-443, gnl|dasNov1|scaffold_215162 (993-1481) | |
| 10-443, gnl|dasNov1|scaffold_215162 (1111-1489) | |
| 10-443, gnl|dasNov1|scaffold_53847 (5282-5615) | |
| 10-443, gnl|dasNov1|scaffold_53847 (5165-5596) | |
| 10-443, gnl|echTel1|scaffold_205217 (557-122) | |
| 10-443, gnl|echTel1|scaffold_284257 (37906-37084) | |
| 10-443, gnl|echTel1|scaffold_284257 (37727-37360) | |
| 10-443, gnl|echTel1|scaffold_284257 (37153-37680) | |
| 10-443, gnl|echTel1|scaffold_284257 (37292-37727) | |
| 10-443, gnl|galGal2|chrUn (18649517-18648727) | |
| 10-443, gnl|galGal2|chrUn (146557928-146558310) | |
| 10-443, gnl|galGal2|chrUn (146558504-146557977) | |
| 10-443, gnl|galGal2|chrUn (146558383-146557928) | |
| 10-443, gnl|galGal2|chrUn (146557830-146558291) | |
| 10-443, gnl|hg17|chr10 (13400279-13400698) | |
| 10-443, gnl|Hg17|chr10 (13400307-13400753) | |
| 10-443, gnl|hg17|chr17 (44969130-44969942) | |
| 10-443, gnl|hg17|chr2 (200351722-200352076) | |
| 10-443, gnl|hg17|chr2 (114732865-114733352) | |
| 10-443, gnl|hg17|chrX (72773628-72774065) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (72509-73321) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (72710-73066) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (73253-72757) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (73134-72710) | |
| 10-443, gnl|loxAfr1|scaffold_24028 (72604-73051) | |
| 10-443, gnl|mm7|chr2 (4824348-4825115) | |
| 10-443, gnl|mm7|chr2 (4824511-4824859) | |
| 10-443, gnl|mm7|chr2 (4825040-4824558) | |
| 10-443, gnl|mm7|chr2 (4824927-4824511) | |
| 10-443, gnl|mm7|chr2 (4824414-4824840) | |
| 10-443, gnl|Mm7|chr2 (4824897-4824457) | |
| 10-443, gnl|monDom2|scaffold_30 (12300915-12300091) | |
| 10-443, gnl|monDom2|scaffold_30 (12300721-12300353) | |
| 10-443, gnl|monDom2|scaffold_30 (12300166-12300669) | |
| 10-443, gnl|monDom2|scaffold_30 (12300283-12300721) | |
| 10-443, gnl|monDom2|scaffold_30 (12300822-12300372) | |
| 10-443, gnl|oryCun1|scaffold_123381 (725-1525) | |
| 10-443, gnl|oryCun1|scaffold_123381 (1451-961) | |
| 10-443, gnl|oryCun1|scaffold_123381 (820-1251) | |
| 10-443, gnl|oryCun1|scaffold_213171 (108960-109368) | |
| 10-443, gnl|panTro1|chr13 (728166-728667) | |
| 10-443, gnl|panTro1|chr13_random (24621413-24621058) | |
| 10-443, gnl|panTro1|chr19_random (43862921-43863733) | |
| 10-443, gnl|panTro1|chr8 (13789908-13790327) | |
| 10-443, gnl|panTro1|chrX (75210656-75211094) | |
| 10-443, gnl|rheMac2|chr12 (63250528-63250898) | |
| 10-443, gnl|rheMac2|chr13 (120411765-120412260) | |
| 10-443, gnl|rheMac2|chr9 (13583467-13582628) | |
| 10-443, gnl|rheMac2|chr9 (13582822-13583267) | |
| 10-443, gnl|rheMac2|chrX (153009809-153009359) | |
| 10-443, gnl|rn3|chr17 (84457407-84456699) | |
| 10-443, gnl|rn3|chr17 (84457248-84456957) | |
| 10-443, gnl|rn3|chr17 (84456774-84457204) | |
| 10-443, gnl|rn3|chr17 (84456889-84457248) | |
| 10-443, gnl|rn3|chr17 (84457343-84456976) | |
| 10-443, gnl|xenTro1|scaffold_200 (435869-435034) | |
| 10-443, gnl|xenTro1|scaffold_200 (435675-435295) | |
| 10-443, gnl|xenTro1|scaffold_200 (435109-435637) | |
| 10-443, gnl|xenTro1|scaffold_200 (435222-435673) | |
| 10-443, gnl|xenTro1|scaffold_200 (435772-435310) |