unkn-SGD602702241.R1
|
TTTGTCCATTAATTTTTATCCTGCTCAGATCCAGCGGAGCAGCACACCCACAGTGAATGG
GCTCTTAGGGATAGGGTCACCACCGTATGTAACCAGAACCTGCATGTTGCCCTGCTGGGT
GGGTGTGTATTTAACGGTGTGAGAGTAGTCATAGTTATCGATGATATCCAGATCCTTCAC
GGCGTCGCCAGGGCCAGGGCTGCTGAACTGCACGTTGAGCGGGGCCTTTCCAGCCCCCTT
GGTGTACACAGTGAAGTGGGTGGGTTTCCCGTTTTCCACACCTGCTTTGCTGAGCCCTGG
GCCTTCTGCCTTCACTTTGCTGGCATCGTGGGAAGGGTCGACCTTGACTCTGAAAGGGCT
GGTGGGGATTTCCTGAGAGGCAAAGAGAACTTTGATGGTGTATCGCCCGGCAGCAGGAGG
CACATATTTGACAGTAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTGTCCATTAATTTTTATCCTGCTCAGATCCAGCGGAGCAGCACACCCACAGTGAATGG
GCTCTTAGGGATAGGGTCACCACCGTATGTAACCAGAACCTGCATGTTGCCCTGCTGGGT
GGGTGTGTATTTAACGGTGTGAGAGTAGTCATAGTTATCGATGATATCCAGATCCTTCAC
GGCGTCGCCAGGGCCAGGGCTGCTGAACTGCACGTTGAGCGGGGCCTTTCCAGCCCCCTT
GGTGTACACAGTGAAGTGGGTGGGTTTCCCGTTTTCCACACCTGCTTTGCTGAGCCCTGG
GCCTTCTGCCTTCACTTTGCTGGCATCGTGGGAAGGGTCGACCTTGACTCTGAAAGGGCT
GGTGGGGATTTCCTGAGAGGCAAAGAGAACTTTGATGGTGTATCGCCCGGCAGCAGGAGG
CACATATTTGACAGTAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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111-284, gnl|bosTau2|chr22 (31799281-31799108) |
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111-284, gnl|canFam2|chr20 (35443549-35443357) |
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111-284, gnl|danRer3|chrUn (92109650-92109458) |
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111-284, gnl|dasNov1|scaffold_1198 (44132-43954) |
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111-284, gnl|echTel1|scaffold_314211 (31957-31765) |
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111-284, gnl|fr1|chrUn (221837852-221838022) |
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111-284, gnl|galGal2|chr12 (8959037-8959233) |
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111-284, gnl|hg17|chr3 (58072899-58073091) |
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111-284, gnl|Hg17|chr3 (58073086-58072913) |
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111-284, gnl|loxAfr1|scaffold_282 (116161-116360) |
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111-284, gnl|mm7|chr14 (5706442-5706634) |
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111-284, gnl|Mm7|chr14 (5706629-5706456) |
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111-284, gnl|monDom2|scaffold_5 (2977780-2977972) |
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111-284, gnl|oryCun1|scaffold_201170 (86072-86261) |
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111-284, gnl|panTro1|chr2 (59824450-59824642) |
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111-284, gnl|rheMac2|chr2 (78280129-78279936) |
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111-284, gnl|rn3|chr15 (19003180-19002991) |
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111-284, gnl|tetNig1|chrUn_random (11653609-11653772) |
|
111-284, gnl|xenTro1|scaffold_80 (2177009-2177194) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
111-284, gnl|bosTau2|chr22 (31799281-31799108) |
|
111-284, gnl|canFam2|chr20 (35443549-35443357) |
|
111-284, gnl|danRer3|chrUn (92109650-92109458) |
|
111-284, gnl|dasNov1|scaffold_1198 (44132-43954) |
|
111-284, gnl|echTel1|scaffold_314211 (31957-31765) |
|
111-284, gnl|fr1|chrUn (221837852-221838022) |
|
111-284, gnl|galGal2|chr12 (8959037-8959233) |
|
111-284, gnl|hg17|chr3 (58072899-58073091) |
|
111-284, gnl|Hg17|chr3 (58073086-58072913) |
|
111-284, gnl|loxAfr1|scaffold_282 (116161-116360) |
|
111-284, gnl|mm7|chr14 (5706442-5706634) |
|
111-284, gnl|Mm7|chr14 (5706629-5706456) |
|
111-284, gnl|monDom2|scaffold_5 (2977780-2977972) |
|
111-284, gnl|oryCun1|scaffold_201170 (86072-86261) |
|
111-284, gnl|panTro1|chr2 (59824450-59824642) |
|
111-284, gnl|rheMac2|chr2 (78280129-78279936) |
|
111-284, gnl|rn3|chr15 (19003180-19002991) |
|
111-284, gnl|tetNig1|chrUn_random (11653609-11653772) |
|
111-284, gnl|xenTro1|scaffold_80 (2177009-2177194) |
