Non-Coding RNA Search

unkn-SGD602702285.R1

Sequence:


               
               TTTTTTTAGAACCTAAAATTTTATTTCTAGTTTGGATTAAAATCTAAACAAAACTCACTC
CCACACACAGTCCCAGGGCTTCTCAAACCCATCAACAGTTCTTTGGCAACATTAGAGAAA
TGTGACTGTCATGCTAATTGGTATACTTTAAAACAAATCTAATCAAAGTCTAATGAATAG
GAAAATAACCAGAAATGTGTGAGAGAAATTCACTTGGAAATAACCGTCACACATTAAGCC
TTGTAAATCTTAAAACCATAAACAAATGATTTTCTCTTATGATATGTGGAGGTTACGTAG
CATTTTCTTCGTTACAGAAAGGCAACTACCACAAGAAATTTATAGGCCATAAAAAGTAAA
AGAGTATTACACGAGAAGGTACTAAAGTAATTTCAGTGTAAGCTATGAGAACAGATTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTAGAACCTAAAATTTTATTTCTAGTTTGGATTAAAATCTAAACAAAACTCACTC
CCACACACAGTCCCAGGGCTTCTCAAACCCATCAACAGTTCTTTGGCAACATTAGAGAAA
TGTGACTGTCATGCTAATTGGTATACTTTAAAACAAATCTAATCAAAGTCTAATGAATAG
GAAAATAACCAGAAATGTGTGAGAGAAATTCACTTGGAAATAACCGTCACACATTAAGCC
TTGTAAATCTTAAAACCATAAACAAATGATTTTCTCTTATGATATGTGGAGGTTACGTAG
CATTTTCTTCGTTACAGAAAGGCAACTACCACAAGAAATTTATAGGCCATAAAAAGTAAA
AGAGTATTACACGAGAAGGTACTAAAGTAATTTCAGTGTAAGCTATGAGAACAGATTAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               179-283, - strand, RNAz p=0.761828

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               179-283, - strand, RNAz p=0.761828

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-419, gnl|bosTau2|chr24 (31646375-31645963)
               

               
               7-419, gnl|Hg17|chr18 (11843132-11842677)
               

               
               7-419, gnl|Mm7|chr18 (67599300-67598881)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-419, gnl|bosTau2|chr24 (31646375-31645963)
               

               
               7-419, gnl|Hg17|chr18 (11843132-11842677)
               

               
               7-419, gnl|Mm7|chr18 (67599300-67598881)

	7-419, gnl\|bosTau2\|chr24 (31646375-31645963)
	7-419, gnl\|Hg17\|chr18 (11843132-11842677)
	7-419, gnl\|Mm7\|chr18 (67599300-67598881)