Non-Coding RNA Search

unkn-SGD602702288.R1

Sequence:


               
               TTTTTTTGCGGGAACTATTTATGTCTCCATGCGCCCAAGCAAGTTACATAAGGGAAAAAG
TCCTTTTTTAAGAGTTGAAACAATTTTTACTGTCATTTGAAACAAACATGAAGACTTTTA
TAAATTGAAACAAAACTCTGAAATATAATGCATTTTTTTTCAATCCTAAATATTTGGGGG
GAGATGCGGTGACAATTTAGGTAGAAAGCATTAGCTTCTGAACAAGTGCCATATGAGTAT
CGCAGCAAGTACTGGCCTTCTCTCTAGTCACAGATTTAAAAGCACAGCTTGCTCGCCACC
ACTCACTCTCACTTGCCTCAGCCCAGCATACACTTAGTGTGTCTGACTTTTCTCAAGGTC
CTGGGGCCACTCAGGCTGCCTTAGTTAATGGGTAGATTTTCTAGATGCCTAAATTATCTG
CCTGTTTTGTGGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTGCGGGAACTATTTATGTCTCCATGCGCCCAAGCAAGTTACATAAGGGAAAAAG
TCCTTTTTTAAGAGTTGAAACAATTTTTACTGTCATTTGAAACAAACATGAAGACTTTTA
TAAATTGAAACAAAACTCTGAAATATAATGCATTTTTTTTCAATCCTAAATATTTGGGGG
GAGATGCGGTGACAATTTAGGTAGAAAGCATTAGCTTCTGAACAAGTGCCATATGAGTAT
CGCAGCAAGTACTGGCCTTCTCTCTAGTCACAGATTTAAAAGCACAGCTTGCTCGCCACC
ACTCACTCTCACTTGCCTCAGCCCAGCATACACTTAGTGTGTCTGACTTTTCTCAAGGTC
CTGGGGCCACTCAGGCTGCCTTAGTTAATGGGTAGATTTTCTAGATGCCTAAATTATCTG
CCTGTTTTGTGGTTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               208-321, - strand, RNAz p=0.687164

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               208-321, - strand, RNAz p=0.687164

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_016255, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_016255, -

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-435, gnl|bosTau2|chr23 (30219954-30220388)
               

               
               1-435, gnl|Hg17|chr6 (17719506-17719037)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-435, gnl|bosTau2|chr23 (30219954-30220388)
               

               
               1-435, gnl|Hg17|chr6 (17719506-17719037)

	1-435, gnl\|bosTau2\|chr23 (30219954-30220388)
	1-435, gnl\|Hg17\|chr6 (17719506-17719037)