Non-Coding RNA Search

unkn-SGD602702350.R1

Sequence:


               
               CAGTCCATCTACTTTCAAGACTCTCCAACTGTCCAGTGATCTTCTCTCTATCAGCCAGCT
CAGCTGACTGTGCTATTCTGCCTCCTTCTGCTTGAAGCATGTCTACTGTGGCCTTTCGAT
CATCTAGTAGCCTCTGGGGGCGAACTTCTGTTCTTGGATCTGGGCTTTCACCTACTTTAT
ACTCAGCAGATGGAGGCTTCTGATTGGCTATGAGCTCCTCAGTGTCTGCCAACCAGCTGA
GCAATGGCTCCAAGGCATCTTGGAACTTCCCACAATGCAACAAAGCCTCTTGCAGTTGTG
CGATTCTTATGTGCAACCTTATTTATTTAGTGTGTTCCACCGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGTCCATCTACTTTCAAGACTCTCCAACTGTCCAGTGATCTTCTCTCTATCAGCCAGCT
CAGCTGACTGTGCTATTCTGCCTCCTTCTGCTTGAAGCATGTCTACTGTGGCCTTTCGAT
CATCTAGTAGCCTCTGGGGGCGAACTTCTGTTCTTGGATCTGGGCTTTCACCTACTTTAT
ACTCAGCAGATGGAGGCTTCTGATTGGCTATGAGCTCCTCAGTGTCTGCCAACCAGCTGA
GCAATGGCTCCAAGGCATCTTGGAACTTCCCACAATGCAACAAAGCCTCTTGCAGTTGTG
CGATTCTTATGTGCAACCTTATTTATTTAGTGTGTTCCACCGAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               38-156, - strand, RNAz p=0.693175

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               38-156, - strand, RNAz p=0.693175

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-156, gnl|bosTau2|chr3 (73189390-73189543)
               

               
               1-156, gnl|Hg17|chr1 (39558934-39558787)
               

               
               1-156, gnl|Mm7|chr4 (122844014-122844169)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-156, gnl|bosTau2|chr3 (73189390-73189543)
               

               
               1-156, gnl|Hg17|chr1 (39558934-39558787)
               

               
               1-156, gnl|Mm7|chr4 (122844014-122844169)

	1-156, gnl\|bosTau2\|chr3 (73189390-73189543)
	1-156, gnl\|Hg17\|chr1 (39558934-39558787)
	1-156, gnl\|Mm7\|chr4 (122844014-122844169)