Non-Coding RNA Search

unkn-SGD602702362.R1

Sequence:


               
               GGCAAAAAATCTCAGCTCAATCACCTCCACACTAAGTGACTTTAGGCCAGCTACTTCAGC
CCCAGCTTCTCTGTGGCTTTTCTCATCTACCGTGTGCTGGGTGTGCCCACTCAGCGCTGG
GCGTGCTCCTTTCCGGGGGTGctttgcgacacatggactgtagccaccaggctcctctgt
ccatggattttcccaggcaagaatacttggagtaggttgccatttccgcctccagggaat
cttcccaacccagggatcgaacctgcgtctcctgcattgtcaggcagattctttaccact
gagccacctaggaagccctTTCATCAACTACAAAATGGATATAATGCTACTCCTCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCAAAAAATCTCAGCTCAATCACCTCCACACTAAGTGACTTTAGGCCAGCTACTTCAGC
CCCAGCTTCTCTGTGGCTTTTCTCATCTACCGTGTGCTGGGTGTGCCCACTCAGCGCTGG
GCGTGCTCCTTTCCGGGGGTGctttgcgacacatggactgtagccaccaggctcctctgt
ccatggattttcccaggcaagaatacttggagtaggttgccatttccgcctccagggaat
cttcccaacccagggatcgaacctgcgtctcctgcattgtcaggcagattctttaccact
gagccacctaggaagccctTTCATCAACTACAAAATGGATATAATGCTACTCCTCAC

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               313-242, tRNA Pseudo : RF00005;tRNA; (AC150860.3/120892-120962), RaveNnA 
Score=32.28

ncRNA annotation: 1 entry(ies)

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PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               313-242, tRNA Pseudo : RF00005;tRNA; (AC150860.3/120892-120962), RaveNnA 
Score=32.28