unkn-SSTL23
|
AGGGCCACGCCCAAGGCATATGGAGGTTCCCAGGCTGGGATTGAGTTAGACAggcctaca
ccacagccacagcaaagccagatgcaagtcgcatttgcaacctgcaccaccgctcacggc
aacgccagatcctttaacccactgagctgggccagggacggaacccgtgtcctcatggat
tctagtcaggttcgctcccactgagccacaacaggaactccAAAACGGGCTTTCTAACTG
TGGACAATGACTCAAAGCTCCCCCTCCTTCTAGAAAGAAATGGAAAGCTAAGTGATTTCC
CAGCAGAGGGGGAGAAAATTCCTCATCTTCCTAAAACTGGCGCAGGCGGAGTCAAGCACA
CGTGGGGCTCTCTCTGGAGCAGATGGTTCTGTGCGCACACACCACGCTTGCCGCGTGCTT
ATGCACGTGTGCGCTTGCTGCTGGTCTCCGTTTCATCCATCTTTTGCAGCTTCTGCCCAC
AGAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGGCCACGCCCAAGGCATATGGAGGTTCCCAGGCTGGGATTGAGTTAGACAggcctaca
ccacagccacagcaaagccagatgcaagtcgcatttgcaacctgcaccaccgctcacggc
aacgccagatcctttaacccactgagctgggccagggacggaacccgtgtcctcatggat
tctagtcaggttcgctcccactgagccacaacaggaactccAAAACGGGCTTTCTAACTG
TGGACAATGACTCAAAGCTCCCCCTCCTTCTAGAAAGAAATGGAAAGCTAAGTGATTTCC
CAGCAGAGGGGGAGAAAATTCCTCATCTTCCTAAAACTGGCGCAGGCGGAGTCAAGCACA
CGTGGGGCTCTCTCTGGAGCAGATGGTTCTGTGCGCACACACCACGCTTGCCGCGTGCTT
ATGCACGTGTGCGCTTGCTGCTGGTCTCCGTTTCATCCATCTTTTGCAGCTTCTGCCCAC
AGAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
221-483, gnl|bosTau2|chr5 (25410846-25411109) |
|
221-483, gnl|canFam2|chr27 (9881774-9881157) |
|
221-483, gnl|echTel1|scaffold_293370 (41226-40728) |
|
221-483, gnl|hg17|chr12 (46566051-46566653) |
|
221-483, gnl|Hg17|chr12 (46566098-46566364) |
|
221-483, gnl|mm7|chr15 (97895189-97895758) |
|
221-483, gnl|Mm7|chr15 (97895235-97895500) |
|
221-483, gnl|panTro1|chr10_random (19783666-19783068) |
|
221-483, gnl|rheMac2|chr11 (44956046-44956653) |
|
221-483, gnl|rn3|chr7 (136676950-136677468) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
221-483, gnl|bosTau2|chr5 (25410846-25411109) |
|
221-483, gnl|canFam2|chr27 (9881774-9881157) |
|
221-483, gnl|echTel1|scaffold_293370 (41226-40728) |
|
221-483, gnl|hg17|chr12 (46566051-46566653) |
|
221-483, gnl|Hg17|chr12 (46566098-46566364) |
|
221-483, gnl|mm7|chr15 (97895189-97895758) |
|
221-483, gnl|Mm7|chr15 (97895235-97895500) |
|
221-483, gnl|panTro1|chr10_random (19783666-19783068) |
|
221-483, gnl|rheMac2|chr11 (44956046-44956653) |
|
221-483, gnl|rn3|chr7 (136676950-136677468) |
