Non-Coding RNA Search

unkn-SofBand_178

Sequence:


               
               CTTTCTACCCGTAGGCCAACCGAATTCTTTCCCCTGCACAAAAAGGTTTTACGCTGAGCA
GATGCTGTGTCACAGTTGCGGTTATATATTTCTGATAGCCTCTGAATTCATCAGGTCCAT
GAAACAGGAAAAAGTAGACTATCAGTCAGGAAGCCTGGCCTGTTCCCCTACCTTTTGCAT
TAATGGGTGGATGTAATTTGAAACAGTATGCCCTTGTGTCACTCAAGTCCAGCTAGTCCA
ATATCCCAGGTTCAATATTTGAACATCAGCTGATGGAGAAAATGGGCTTTGGAAATGCTT
TATGAATCTCTTAAATACCCTTCCATTTCATCACTCAGATTTCTGAACAGGAGTTGGAAA
TAATGCTAATTTCCTCTTTCTTATTCTCTTTTTTTTTCTTACTGNGAAAAATAATAGTCA
ACCCCAAGTCATACACTGGACCTGTCACCTGCTGGGGACAGGGCTATGGGTTTCCTGGGC
ACATCTGNGGTGTGCTCAATGCAGTGTANACATGGTTTAAAATAAAACAGATGATTGAGT
GGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTCTACCCGTAGGCCAACCGAATTCTTTCCCCTGCACAAAAAGGTTTTACGCTGAGCA
GATGCTGTGTCACAGTTGCGGTTATATATTTCTGATAGCCTCTGAATTCATCAGGTCCAT
GAAACAGGAAAAAGTAGACTATCAGTCAGGAAGCCTGGCCTGTTCCCCTACCTTTTGCAT
TAATGGGTGGATGTAATTTGAAACAGTATGCCCTTGTGTCACTCAAGTCCAGCTAGTCCA
ATATCCCAGGTTCAATATTTGAACATCAGCTGATGGAGAAAATGGGCTTTGGAAATGCTT
TATGAATCTCTTAAATACCCTTCCATTTCATCACTCAGATTTCTGAACAGGAGTTGGAAA
TAATGCTAATTTCCTCTTTCTTATTCTCTTTTTTTTTCTTACTGNGAAAAATAATAGTCA
ACCCCAAGTCATACACTGGACCTGTCACCTGCTGGGGACAGGGCTATGGGTTTCCTGGGC
ACATCTGNGGTGTGCTCAATGCAGTGTANACATGGTTTAAAATAAAACAGATGATTGAGT
GGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               302-420, + strand, RNAz p=0.607154

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               302-420, + strand, RNAz p=0.607154

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_006474, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_006474, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-541, gnl|bosTau2|chr16 (40358897-40358358)
               

               
               2-541, gnl|Hg17|chr1 (13688937-13689755)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-541, gnl|bosTau2|chr16 (40358897-40358358)
               

               
               2-541, gnl|Hg17|chr1 (13688937-13689755)

	2-541, gnl\|bosTau2\|chr16 (40358897-40358358)
	2-541, gnl\|Hg17\|chr1 (13688937-13689755)