Non-Coding RNA Search

unkn-ZP0909G1

Sequence:


               
               TAAGCCTAGCAGACGAAGGAGCTGAAAAGTGAGTATACCAAATTAGAAGAAAAGCTCAAG
GAGTCTGAGGAAGCGAAGGAGGAGCTGAAGAGGTCCTCTCTTGCTCTACAGGAGGAGAAG
CAAGGTTTATCCAAAGAGATTGAGAGCTTGAAAGGATCTATATCCCAGCTAAAGAAACAG
TTGACAGCCTTGCAAGAAGAAGGTACTTTAGGAATATTTCAGCCCCAGTTAAGAGTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAGCCTAGCAGACGAAGGAGCTGAAAAGTGAGTATACCAAATTAGAAGAAAAGCTCAAG
GAGTCTGAGGAAGCGAAGGAGGAGCTGAAGAGGTCCTCTCTTGCTCTACAGGAGGAGAAG
CAAGGTTTATCCAAAGAGATTGAGAGCTTGAAAGGATCTATATCCCAGCTAAAGAAACAG
TTGACAGCCTTGCAAGAAGAAGGTACTTTAGGAATATTTCAGCCCCAGTTAAGAGTAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               8-166, + strand, RNAz p=0.939321

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               8-166, + strand, RNAz p=0.939321

Aligned organism(s): 18 entry(ies)

More info

Aligned organism(s): 18 entry(ies)

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               8-240, gnl|bosTau2|chr1 (40628385-40628153)
               

               
               8-240, gnl|canFam2|chr33 (28003200-28003811)
               

               
               8-240, gnl|danRer3|chr4 (28632361-28631855)
               

               
               8-240, gnl|dasNov1|scaffold_1050 (79769-80380)
               

               
               8-240, gnl|echTel1|scaffold_285666 (312771-313382)
               

               
               8-240, gnl|fr1|chrUn (221484382-221483885)
               

               
               8-240, gnl|galGal2|chrUn (6101167-6101778)
               

               
               8-240, gnl|hg17|chr3 (122892615-122893226)
               

               
               8-240, gnl|Hg17|chr3 (122893207-122892975)
               

               
               8-240, gnl|loxAfr1|scaffold_54998 (32005-31394)
               

               
               8-240, gnl|mm7|chr16 (36627772-36627182)
               

               
               8-240, gnl|Mm7|chr16 (36627199-36627410)
               

               
               8-240, gnl|monDom2|scaffold_24 (18992920-18992309)
               

               
               8-240, gnl|oryCun1|scaffold_211323 (29994-29383)
               

               
               8-240, gnl|panTro1|chr2 (124583154-124583765)
               

               
               8-240, gnl|rheMac2|chr2 (41680726-41681337)
               

               
               8-240, gnl|rn3|chr11 (65717552-65718142)
               

               
               8-240, gnl|xenTro1|scaffold_62 (2698094-2697503)

Aligned organism(s): 18 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-240, gnl|bosTau2|chr1 (40628385-40628153)
               

               
               8-240, gnl|canFam2|chr33 (28003200-28003811)
               

               
               8-240, gnl|danRer3|chr4 (28632361-28631855)
               

               
               8-240, gnl|dasNov1|scaffold_1050 (79769-80380)
               

               
               8-240, gnl|echTel1|scaffold_285666 (312771-313382)
               

               
               8-240, gnl|fr1|chrUn (221484382-221483885)
               

               
               8-240, gnl|galGal2|chrUn (6101167-6101778)
               

               
               8-240, gnl|hg17|chr3 (122892615-122893226)
               

               
               8-240, gnl|Hg17|chr3 (122893207-122892975)
               

               
               8-240, gnl|loxAfr1|scaffold_54998 (32005-31394)
               

               
               8-240, gnl|mm7|chr16 (36627772-36627182)
               

               
               8-240, gnl|Mm7|chr16 (36627199-36627410)
               

               
               8-240, gnl|monDom2|scaffold_24 (18992920-18992309)
               

               
               8-240, gnl|oryCun1|scaffold_211323 (29994-29383)
               

               
               8-240, gnl|panTro1|chr2 (124583154-124583765)
               

               
               8-240, gnl|rheMac2|chr2 (41680726-41681337)
               

               
               8-240, gnl|rn3|chr11 (65717552-65718142)
               

               
               8-240, gnl|xenTro1|scaffold_62 (2698094-2697503)

	8-240, gnl\|bosTau2\|chr1 (40628385-40628153)
	8-240, gnl\|canFam2\|chr33 (28003200-28003811)
	8-240, gnl\|danRer3\|chr4 (28632361-28631855)
	8-240, gnl\|dasNov1\|scaffold_1050 (79769-80380)
	8-240, gnl\|echTel1\|scaffold_285666 (312771-313382)
	8-240, gnl\|fr1\|chrUn (221484382-221483885)
	8-240, gnl\|galGal2\|chrUn (6101167-6101778)
	8-240, gnl\|hg17\|chr3 (122892615-122893226)
	8-240, gnl\|Hg17\|chr3 (122893207-122892975)
	8-240, gnl\|loxAfr1\|scaffold_54998 (32005-31394)
	8-240, gnl\|mm7\|chr16 (36627772-36627182)
	8-240, gnl\|Mm7\|chr16 (36627199-36627410)
	8-240, gnl\|monDom2\|scaffold_24 (18992920-18992309)
	8-240, gnl\|oryCun1\|scaffold_211323 (29994-29383)
	8-240, gnl\|panTro1\|chr2 (124583154-124583765)
	8-240, gnl\|rheMac2\|chr2 (41680726-41681337)
	8-240, gnl\|rn3\|chr11 (65717552-65718142)
	8-240, gnl\|xenTro1\|scaffold_62 (2698094-2697503)