unkn-sbt46
|
ATTAGCGGATAACAATTTCACACAGGATTTTGGCTCCTTGGTCCTTTTAAATATTTTCCT
TTTCTGCAGGTGGTTAATACCTCCATTAAAATATATACCCAATCCTCTGTAGCCTTTCTT
TTGTATGTAGGATTAATAAAGAGTTCATGAACCAATATCCCACATGTAGCTCAGTTACCT
ATTCATGCATTTCTAATCTTTTCCTGGGTTACAAGTATGTGGGCTCTTGAACCAATCAAA
GAAGTTATTTTTTTCTTTTTCATGATAGGCCTTTCTATTTAAGGAACTCCTTTTTAACAG
AGAGATTTATCAGGTATTTGCCCTCTGTAGCTATAATGCAAAGTGCCTGAAAAGCGTACT
AAGATATATGAGAATCAGGTATCAAACTTGGACTTAAGCAATTGCCATTGGAATTTTAGC
TATGATATCTCTATATGTATTTTTATCTTTATATTTGTATTTGTTCATAATTCTTGGGTG
TAGTATTTTGAACATACTACATGTTTTAGGAATAGACATATGACAACACATCTGATTTCT
TTGAATGTTGAATCAAGACAAAAAATACTTGAAGGGTTGTCTGCTATGAGCTGGGAACCA
CAATATGTAAAGAGATAAAGAAATGGAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATTAGCGGATAACAATTTCACACAGGATTTTGGCTCCTTGGTCCTTTTAAATATTTTCCT
TTTCTGCAGGTGGTTAATACCTCCATTAAAATATATACCCAATCCTCTGTAGCCTTTCTT
TTGTATGTAGGATTAATAAAGAGTTCATGAACCAATATCCCACATGTAGCTCAGTTACCT
ATTCATGCATTTCTAATCTTTTCCTGGGTTACAAGTATGTGGGCTCTTGAACCAATCAAA
GAAGTTATTTTTTTCTTTTTCATGATAGGCCTTTCTATTTAAGGAACTCCTTTTTAACAG
AGAGATTTATCAGGTATTTGCCCTCTGTAGCTATAATGCAAAGTGCCTGAAAAGCGTACT
AAGATATATGAGAATCAGGTATCAAACTTGGACTTAAGCAATTGCCATTGGAATTTTAGC
TATGATATCTCTATATGTATTTTTATCTTTATATTTGTATTTGTTCATAATTCTTGGGTG
TAGTATTTTGAACATACTACATGTTTTAGGAATAGACATATGACAACACATCTGATTTCT
TTGAATGTTGAATCAAGACAAAAAATACTTGAAGGGTTGTCTGCTATGAGCTGGGAACCA
CAATATGTAAAGAGATAAAGAAATGGAAAAAAAAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
20-281, gnl|bosTau2|chr16 (15034419-15034671) |
|
20-281, gnl|Hg17|chr9 (77637985-77637760) |
| |
|
388-635, gnl|bosTau2|chr16 (15034724-15034971) |
|
388-635, gnl|canFam2|chr1 (83924488-83924271) |
|
388-635, gnl|dasNov1|scaffold_101944 (4024-3812) |
|
388-635, gnl|echTel1|scaffold_314406 (41525-41311) |
|
388-635, gnl|hg17|chr9 (77637400-77637617) |
|
388-635, gnl|Hg17|chr9 (77637660-77637418) |
|
388-635, gnl|loxAfr1|scaffold_868 (36103-36322) |
|
388-635, gnl|mm7|chr19 (16037494-16037329) |
|
388-635, gnl|oryCun1|scaffold_129636 (3731-3524) |
|
388-635, gnl|panTro1|chr11 (61518590-61518807) |
|
388-635, gnl|rheMac2|chr15 (86499219-86499440) |
|
388-635, gnl|rn3|chr1 (219888602-219888434) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
20-281, gnl|bosTau2|chr16 (15034419-15034671) |
|
20-281, gnl|Hg17|chr9 (77637985-77637760) |
| |
|
388-635, gnl|bosTau2|chr16 (15034724-15034971) |
|
388-635, gnl|canFam2|chr1 (83924488-83924271) |
|
388-635, gnl|dasNov1|scaffold_101944 (4024-3812) |
|
388-635, gnl|echTel1|scaffold_314406 (41525-41311) |
|
388-635, gnl|hg17|chr9 (77637400-77637617) |
|
388-635, gnl|Hg17|chr9 (77637660-77637418) |
|
388-635, gnl|loxAfr1|scaffold_868 (36103-36322) |
|
388-635, gnl|mm7|chr19 (16037494-16037329) |
|
388-635, gnl|oryCun1|scaffold_129636 (3731-3524) |
|
388-635, gnl|panTro1|chr11 (61518590-61518807) |
|
388-635, gnl|rheMac2|chr15 (86499219-86499440) |
|
388-635, gnl|rn3|chr1 (219888602-219888434) |
