Non-Coding RNA Search

Ss1.1-4civ-UMC-p4civv1-015-d03.3.5

Sequence:


               
               TGAGGTCCATCCCCGGCCCACGTGTGACAGGGTGAGTAAGGAACTCGGTCCTTCCCCGCA
CCTGGCAAGCATCTCAAACTCAAATGCACAACCTGGGGGCGCGGGTGGGTAGCACCAGTC
TTCTGTGGACTAGGACAGCCTATGACGATGGTTGCAAATGACACAGCTCACAGCCTTCCA
GGCAGGTTCTTAGGACCACAGTAAGATGGCAGACCTGGTTGTTGGAAAAGACCTGGGGGG
GAGGAGGTGAAAAACACCATCTCAGAGACAAGGGCTGGAGAAAACACAAAGAAAGAGATG
TGTGAACCGATCCATGAATGAAAAAGCGAGAGTGAGTTTGTGAGCAGAAAAGAGGTGAAG
AGAGGAGAAGAGAATCCTCAAAAGATTTCATCTGCAGCAAAATCTAGGCCAGAAAGAAAA
CCTGCCCTTTATTAACAGCTGACCCAGAAGACAACGGAATGGCGGTGTGGCCGCTGTGCA
GCCTCTCAGGAGGGGCAGGCAGGTCGCCTGCCACCCTGAATCAGCTTGATGGTTACACAA
TTGCATCATTAGGATGTCCAGTTCAAACCCCTTGTATTAATATTGAATTAGGCTTTCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGGTCCATCCCCGGCCCACGTGTGACAGGGTGAGTAAGGAACTCGGTCCTTCCCCGCA
CCTGGCAAGCATCTCAAACTCAAATGCACAACCTGGGGGCGCGGGTGGGTAGCACCAGTC
TTCTGTGGACTAGGACAGCCTATGACGATGGTTGCAAATGACACAGCTCACAGCCTTCCA
GGCAGGTTCTTAGGACCACAGTAAGATGGCAGACCTGGTTGTTGGAAAAGACCTGGGGGG
GAGGAGGTGAAAAACACCATCTCAGAGACAAGGGCTGGAGAAAACACAAAGAAAGAGATG
TGTGAACCGATCCATGAATGAAAAAGCGAGAGTGAGTTTGTGAGCAGAAAAGAGGTGAAG
AGAGGAGAAGAGAATCCTCAAAAGATTTCATCTGCAGCAAAATCTAGGCCAGAAAGAAAA
CCTGCCCTTTATTAACAGCTGACCCAGAAGACAACGGAATGGCGGTGTGGCCGCTGTGCA
GCCTCTCAGGAGGGGCAGGCAGGTCGCCTGCCACCCTGAATCAGCTTGATGGTTACACAA
TTGCATCATTAGGATGTCCAGTTCAAACCCCTTGTATTAATATTGAATTAGGCTTTCCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-600, gnl|bosTau2|chr8 (39486166-39486771)
               

               
               1-600, gnl|Hg17|chr8 (26570244-26569636)
               

               
               1-600, gnl|Mm7|chr14 (61665166-61665763)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-600, gnl|bosTau2|chr8 (39486166-39486771)
               

               
               1-600, gnl|Hg17|chr8 (26570244-26569636)
               

               
               1-600, gnl|Mm7|chr14 (61665166-61665763)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ebs (0.118301)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)
               

               
               cty (0.10408)

	1-600, gnl\|bosTau2\|chr8 (39486166-39486771)
	1-600, gnl\|Hg17\|chr8 (26570244-26569636)
	1-600, gnl\|Mm7\|chr14 (61665166-61665763)