Non-Coding RNA Search

Ss1.1-Blo1-PBL010004F02.5

Sequence:


               
               ACTGAACGCTCAGCCTGAGGCACAACAAAGCACACTTGTACAGGGGAATCCGTGCCACAT
GCCGCTCTCCAGCCTGCTCTGGCTCTTCCTGGCCTCCGTCTTCTCTGGATCCGGTGTGAC
CCAGGAAGTTACTCAAGACCAGCCAGCTGTGTTCAGTCAAGTGGGAGAGGCAGTCACCCT
AAACTGTCGCTATGAAATAGGTTGGACCTGTATCTACTACAATCTTTTTTGGTATAAACA
GCCTCCCAGTGGAGAGATGACTTTCCTTATTCATCAGTATTCTGATAGCTCAAATGCAAG
GGATGGCCGCTACTCCGTAAACTTCCAGAAAGCACAAAATTTCATCAGCCTCACCATTTC
AGCCTTACAGCTGGATGATTCTGCTACGTACTTCTGTGCTCTCCGAGATCTCACGGTGCT
TGAAGTAATAGGAAAAGGTGAACAAAAACCCCAGAGCTCAATAAGAGAGAGCCCCCCTGC
TGCAGGACCCAAGCTGAAATGCACACCTGCAGACCCCAGACAAGAAGTGGTTGTCCTGTG
GTTGCTTCATCTGTGGTCTGGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGAACGCTCAGCCTGAGGCACAACAAAGCACACTTGTACAGGGGAATCCGTGCCACAT
GCCGCTCTCCAGCCTGCTCTGGCTCTTCCTGGCCTCCGTCTTCTCTGGATCCGGTGTGAC
CCAGGAAGTTACTCAAGACCAGCCAGCTGTGTTCAGTCAAGTGGGAGAGGCAGTCACCCT
AAACTGTCGCTATGAAATAGGTTGGACCTGTATCTACTACAATCTTTTTTGGTATAAACA
GCCTCCCAGTGGAGAGATGACTTTCCTTATTCATCAGTATTCTGATAGCTCAAATGCAAG
GGATGGCCGCTACTCCGTAAACTTCCAGAAAGCACAAAATTTCATCAGCCTCACCATTTC
AGCCTTACAGCTGGATGATTCTGCTACGTACTTCTGTGCTCTCCGAGATCTCACGGTGCT
TGAAGTAATAGGAAAAGGTGAACAAAAACCCCAGAGCTCAATAAGAGAGAGCCCCCCTGC
TGCAGGACCCAAGCTGAAATGCACACCTGCAGACCCCAGACAAGAAGTGGTTGTCCTGTG
GTTGCTTCATCTGTGGTCTGGATA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61874418|ref|XP_593274.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61874418|ref|XP_593274.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               107-563, gnl|bosTau2|chr10 (15507704-15508159)
               

               
               107-563, gnl|Hg17|chr14 (21634438-21634906)
               

               
               107-563, gnl|Mm7|chr16 (55806343-55806801)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               107-563, gnl|bosTau2|chr10 (15507704-15508159)
               

               
               107-563, gnl|Hg17|chr14 (21634438-21634906)
               

               
               107-563, gnl|Mm7|chr16 (55806343-55806801)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	107-563, gnl\|bosTau2\|chr10 (15507704-15508159)
	107-563, gnl\|Hg17\|chr14 (21634438-21634906)
	107-563, gnl\|Mm7\|chr16 (55806343-55806801)