Non-Coding RNA Search

Ss1.1-Blo1-PBL010028B08.5

Sequence:


               
               TTTAAAGCTTTGTTTTACTAACCAAAATGTTTCTGATTTAAAAATGTTTTTAAATTTGGC
AGTTAAGGCGCATGTATTAAATTACCTTAATTTCTTTTCTCAAAGCAATACATATATTTT
TTTGTTTGTTTTTAGAAGTCGAAGAATACAAGGGGAGCTTATAAAGAAATCCTGCATCAC
CTCTTCCATTCCTTCCCATCTCTAATTCCTTTGGCAACCATTTTTAATCTAGTTAATTGC
TGCTTTTGTAAATTCTGTATTCTAGATCTATAGTTAAAAGGAATATGCTTTGACGATCTA
TGTTAACTATTTTCTGTTGATTTCCTGTCATGAGCTCTGAGGATCTCTCTTTCCCCCCAG
CCCCCTCCTCCCACACACATACATGTTCTCTTTCCTTCCTACCTCCCAGTGCAGTTAGAT
GACATCTTCTATTTCATTATGGTGACATTACAGAGATTGCACATTCTTTTTTATACACCT
TTTTTTCTTTCCTGGAATTAGACATCTATTATTTTTCCATCTGTTTTAATTTCTGAACCC
ATGCCATTCTTTCCAAACATACACAGAACTATATATAAAGCCTCTCAAAAAGCAAACAGC
AGGAATGGAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAAAGCTTTGTTTTACTAACCAAAATGTTTCTGATTTAAAAATGTTTTTAAATTTGGC
AGTTAAGGCGCATGTATTAAATTACCTTAATTTCTTTTCTCAAAGCAATACATATATTTT
TTTGTTTGTTTTTAGAAGTCGAAGAATACAAGGGGAGCTTATAAAGAAATCCTGCATCAC
CTCTTCCATTCCTTCCCATCTCTAATTCCTTTGGCAACCATTTTTAATCTAGTTAATTGC
TGCTTTTGTAAATTCTGTATTCTAGATCTATAGTTAAAAGGAATATGCTTTGACGATCTA
TGTTAACTATTTTCTGTTGATTTCCTGTCATGAGCTCTGAGGATCTCTCTTTCCCCCCAG
CCCCCTCCTCCCACACACATACATGTTCTCTTTCCTTCCTACCTCCCAGTGCAGTTAGAT
GACATCTTCTATTTCATTATGGTGACATTACAGAGATTGCACATTCTTTTTTATACACCT
TTTTTTCTTTCCTGGAATTAGACATCTATTATTTTTCCATCTGTTTTAATTTCTGAACCC
ATGCCATTCTTTCCAAACATACACAGAACTATATATAAAGCCTCTCAAAAAGCAAACAGC
AGGAATGGAGTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-580, gnl|bosTau2|chr12 (12192783-12193362)
               

               
               3-580, gnl|Hg17|chr13 (39149786-39150693)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-580, gnl|bosTau2|chr12 (12192783-12193362)
               

               
               3-580, gnl|Hg17|chr13 (39149786-39150693)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	3-580, gnl\|bosTau2\|chr12 (12192783-12193362)
	3-580, gnl\|Hg17\|chr13 (39149786-39150693)