Ss1.1-Blo1-PBL010046C12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCCACGCGTCCGCCCACCTCGACCCTCTCACACGACTCCTGACAGTAACTTCGGGACAG AGAATGTGCTTCGGATTCATGTATTAGAGGCCCAGGACCTGATTGCCAAAGACCGTTTCT TGGGGGGATTGGTGAAGGGCAAATCAGACCCCTATGTCAAACTAAAGCTGGCAGGACGAA GCTTCCGGAGCCGTGTCATTCGGGAAGATCTCAATCCCCACTGGAATGAGGTCTTTGAGG TGATCGTCACATCAATTCCAGGCCAAGAGCTAGAGGCTGAGGTTTTTGACAAGGACCTGG ACAAGGATGACTTTCTGGGCAGGTGCAAAGTAAGCCTCACCACAGTCCTAAACAGTGGTT TCCTTGATGAGTGGCTGACCCTGGAGGATGTCCCATCTGGTCGCCTGCACTTGCGTCTGG AGCGTCTTACGCCCCGTCCCACTGCTGCTGAGCTAGAGGAGGTAAGTAAGGAAGCATGTG CGAGGACAAAAGGAACCCTGGATGTGTCAAGGTGAAATCTATCAGCTTTTAAGGCACATG CCTGGCCCCAGAGTGTCAGTAACCACTCCCCAGCTCCTGTGTGTCCCACCCCAGGTGCTG CAGGTGAACAGTTTGATCCAGACTCAGAAGAGTGCAGAGCTGGCAGCGGCCCTGCTCTCC GTCTACCTGGAGCGGGCTGAGGACCTGCCGGTGAGATCTGCTCCCCACACCCCATAGCTC CCTGGCCCTTCTTCCGCCTCCCTCAGGTTTGGGTGCCTCTAGTGTATTTGGAATAGTAAA TTACAAATTCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCCACGCGTCCGCCCACCTCGACCCTCTCACACGACTCCTGACAGTAACTTCGGGACAG AGAATGTGCTTCGGATTCATGTATTAGAGGCCCAGGACCTGATTGCCAAAGACCGTTTCT TGGGGGGATTGGTGAAGGGCAAATCAGACCCCTATGTCAAACTAAAGCTGGCAGGACGAA GCTTCCGGAGCCGTGTCATTCGGGAAGATCTCAATCCCCACTGGAATGAGGTCTTTGAGG TGATCGTCACATCAATTCCAGGCCAAGAGCTAGAGGCTGAGGTTTTTGACAAGGACCTGG ACAAGGATGACTTTCTGGGCAGGTGCAAAGTAAGCCTCACCACAGTCCTAAACAGTGGTT TCCTTGATGAGTGGCTGACCCTGGAGGATGTCCCATCTGGTCGCCTGCACTTGCGTCTGG AGCGTCTTACGCCCCGTCCCACTGCTGCTGAGCTAGAGGAGGTAAGTAAGGAAGCATGTG CGAGGACAAAAGGAACCCTGGATGTGTCAAGGTGAAATCTATCAGCTTTTAAGGCACATG CCTGGCCCCAGAGTGTCAGTAACCACTCCCCAGCTCCTGTGTGTCCCACCCCAGGTGCTG CAGGTGAACAGTTTGATCCAGACTCAGAAGAGTGCAGAGCTGGCAGCGGCCCTGCTCTCC GTCTACCTGGAGCGGGCTGAGGACCTGCCGGTGAGATCTGCTCCCCACACCCCATAGCTC CCTGGCCCTTCTTCCGCCTCCCTCAGGTTTGGGTGCCTCTAGTGTATTTGGAATAGTAAA TTACAAATTCCT |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 61-241, gnl|bosTau2|chr5 (33481325-33481145) | |
| 61-241, gnl|canFam2|chr10 (3439311-3439526) | |
| 61-241, gnl|danRer3|chrUn (37247121-37247327) | |
| 61-241, gnl|dasNov1|scaffold_25293 (11142-10950) | |
| 61-241, gnl|echTel1|scaffold_325469 (48483-48698) | |
| 61-241, gnl|fr1|chrUn (41052416-41052625) | |
| 61-241, gnl|hg17|chr12 (54817523-54817736) | |
| 61-241, gnl|Hg17|chr12 (54817548-54817728) | |
| 61-241, gnl|loxAfr1|scaffold_13800 (46144-46358) | |
| 61-241, gnl|mm7|chr10 (128018916-128018714) | |
| 61-241, gnl|Mm7|chr10 (128018900-128018720) | |
| 61-241, gnl|oryCun1|scaffold_213038 (51632-51430) | |
| 61-241, gnl|panTro1|chr10 (56065925-56066136) | |
| 61-241, gnl|rheMac2|chr11 (53195655-53195868) | |
| 61-241, gnl|rn3|chr7 (1798629-1798427) | |
| 61-241, gnl|tetNig1|chr9 (3978043-3978249) | |
| 61-241, gnl|xenTro1|scaffold_85 (2176675-2176867) | |
| 370-792, gnl|bosTau2|chr5 (33480400-33479983) | |
| 370-792, gnl|Hg17|chr12 (54818232-54818653) | |
| 370-792, gnl|Mm7|chr10 (128018218-128017848) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 61-241, gnl|bosTau2|chr5 (33481325-33481145) | |
| 61-241, gnl|canFam2|chr10 (3439311-3439526) | |
| 61-241, gnl|danRer3|chrUn (37247121-37247327) | |
| 61-241, gnl|dasNov1|scaffold_25293 (11142-10950) | |
| 61-241, gnl|echTel1|scaffold_325469 (48483-48698) | |
| 61-241, gnl|fr1|chrUn (41052416-41052625) | |
| 61-241, gnl|hg17|chr12 (54817523-54817736) | |
| 61-241, gnl|Hg17|chr12 (54817548-54817728) | |
| 61-241, gnl|loxAfr1|scaffold_13800 (46144-46358) | |
| 61-241, gnl|mm7|chr10 (128018916-128018714) | |
| 61-241, gnl|Mm7|chr10 (128018900-128018720) | |
| 61-241, gnl|oryCun1|scaffold_213038 (51632-51430) | |
| 61-241, gnl|panTro1|chr10 (56065925-56066136) | |
| 61-241, gnl|rheMac2|chr11 (53195655-53195868) | |
| 61-241, gnl|rn3|chr7 (1798629-1798427) | |
| 61-241, gnl|tetNig1|chr9 (3978043-3978249) | |
| 61-241, gnl|xenTro1|scaffold_85 (2176675-2176867) | |
| 370-792, gnl|bosTau2|chr5 (33480400-33479983) | |
| 370-792, gnl|Hg17|chr12 (54818232-54818653) | |
| 370-792, gnl|Mm7|chr10 (128018218-128017848) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ill (0.175593) | |
| jca (0.11396) |