Non-Coding RNA Search

Ss1.1-Blo2-AR038H05PBC30AH05S.5

Sequence:


               
               AAAGAAAGTAACATGATAAATTATTTATAAGAAGATAAAAATATATGATAAGGAATTACC
TAAGGCAGGCAGCAAGCAGATCAGGAATCAATGCCTCTGCATAGGAAGGGGCAGTCCAGT
AAAATCCGAGGAGGTGAAACTGATTACATGAACTCTCATTTCTTAGCTGCCTTCGATACA
AAAATGTTGAAGGTAGGAAGTGGAATGGAATTTTAAGGGGTTTAGCTTACTTTTTTTTTT
TAAGGCTCCACTCAGAGATTATATAGCAAAAATGAAAACTCCTCATTTTAATATTTTCAG
TTCAAAACTTCCCGACCTTGGAGAGTCAGAATTGCTCCGACATTCAAGTGTGTAAGAAGC
CCGTTGCTGGGGAGCCAGTGCTCACATACATTTGGCCTGTGTGTTGCTCTGGTGTATGGA
GAGTTCACACCTTTTTACTTCGCCTCATTCCTATTATCTCACTGGATTACACATTTTTTT
AAAGTTAGTGATTCTCACCTGATCCAGTCTCTATTTTAACAGTACATTCTCATGTGCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGAAAGTAACATGATAAATTATTTATAAGAAGATAAAAATATATGATAAGGAATTACC
TAAGGCAGGCAGCAAGCAGATCAGGAATCAATGCCTCTGCATAGGAAGGGGCAGTCCAGT
AAAATCCGAGGAGGTGAAACTGATTACATGAACTCTCATTTCTTAGCTGCCTTCGATACA
AAAATGTTGAAGGTAGGAAGTGGAATGGAATTTTAAGGGGTTTAGCTTACTTTTTTTTTT
TAAGGCTCCACTCAGAGATTATATAGCAAAAATGAAAACTCCTCATTTTAATATTTTCAG
TTCAAAACTTCCCGACCTTGGAGAGTCAGAATTGCTCCGACATTCAAGTGTGTAAGAAGC
CCGTTGCTGGGGAGCCAGTGCTCACATACATTTGGCCTGTGTGTTGCTCTGGTGTATGGA
GAGTTCACACCTTTTTACTTCGCCTCATTCCTATTATCTCACTGGATTACACATTTTTTT
AAAGTTAGTGATTCTCACCTGATCCAGTCTCTATTTTAACAGTACATTCTCATGTGCTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-538, gnl|bosTau2|chr26 (30143696-30144216)
               

               
               1-538, gnl|Hg17|chr15 (40825176-40824654)
               

               
               1-538, gnl|Mm7|chr2 (120480465-120479980)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-538, gnl|bosTau2|chr26 (30143696-30144216)
               

               
               1-538, gnl|Hg17|chr15 (40825176-40824654)
               

               
               1-538, gnl|Mm7|chr2 (120480465-120479980)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cte (0.29274)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               pgl (0.118483)

	1-538, gnl\|bosTau2\|chr26 (30143696-30144216)
	1-538, gnl\|Hg17\|chr15 (40825176-40824654)
	1-538, gnl\|Mm7\|chr2 (120480465-120479980)