Non-Coding RNA Search

Ss1.1-Bra1-PBL_15_E02.5

Sequence:


               
               CAGGTACCGGTCCGGAATCCCGGGTCGACCCACGCGTTCGAAATTCTGCAGTGTTATAGG
TAAGGTTTCCCTTCTAGATTTTTTTTTCAGCTCTATTGAAATATAATTTACAAAATGTAA
GATATTTAAAATGTACACCGTGATGATTTGATAGAAGCATACACTGTGAAAGTGTTTTTC
CCATCTAGTTAATTAACACATCCATCACCTTCTGTATTTATCTTTTTTTTAAAAGAAGAC
ATTTAAGTTCTGCTCTCTTAACAAATTTCGATTATTCATACAGTGTTATCAACTATAGTC
ACTATGTTACACATTACATTTTCAGACCTTATTCATCTTATAGCTGAAGTTTGTACCATT
TTATCAACCTCTCTCTAATTTCCTCACTCCCCAGCTCTGCCCTTTTTAGCATTTATAGAC
TGGTATCTTTTGATGTCTTAACAAGACTGAATAAACAAAGTTGTGAAGGGCTAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGTACCGGTCCGGAATCCCGGGTCGACCCACGCGTTCGAAATTCTGCAGTGTTATAGG
TAAGGTTTCCCTTCTAGATTTTTTTTTCAGCTCTATTGAAATATAATTTACAAAATGTAA
GATATTTAAAATGTACACCGTGATGATTTGATAGAAGCATACACTGTGAAAGTGTTTTTC
CCATCTAGTTAATTAACACATCCATCACCTTCTGTATTTATCTTTTTTTTAAAAGAAGAC
ATTTAAGTTCTGCTCTCTTAACAAATTTCGATTATTCATACAGTGTTATCAACTATAGTC
ACTATGTTACACATTACATTTTCAGACCTTATTCATCTTATAGCTGAAGTTTGTACCATT
TTATCAACCTCTCTCTAATTTCCTCACTCCCCAGCTCTGCCCTTTTTAGCATTTATAGAC
TGGTATCTTTTGATGTCTTAACAAGACTGAATAAACAAAGTTGTGAAGGGCTAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               79-399, gnl|bosTau2|chr10 (52084228-52084539)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               79-399, gnl|bosTau2|chr10 (52084228-52084539)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fbs (0.175346)
               

               
               fhi (0.169578)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               fhi (0.169578)