Non-Coding RNA Search

Ss1.1-Bra1-olf_051_E05.5

Sequence:


               
               AAATTGATGACCATTTAATAATTCCAGGCACATGGCCATAGAGACCCTCTAAATAAATAA
GGAATAAATACTTATTAGGCAGGTGGGAGATTATGATCAGAAGAACAGGTAACTACACCT
ACGCATTTTTCAGAAAGTCAGGAGTCGAAATTGACAGTACTGAAGTATAATGCGGTCCAC
ATTTCCAAAGTTTGCATGTTAAATTGAAATGCTTACCATCTCATCTAGTGTTAGCCAATG
CTTTACACTTATTAGCCTTTTATATAGACACTTGGTGGGGGGCATGTGGGTTTTTTAAAG
AACTTTCCTTTGCAGAGGCTTCGTTTCATCCTTCATGAGGCTGTTCAGGATTTTGACTTG
CATATAAACGCTTGGCTCTGCCTTCTGTTCTCCTAGTGGGTGTGTGAGACCTTGCAGTGA
GTTTTCAGCATACTCAAGTAAAAATTTTTTTCCCCCTGATTTTGGAGGGAAGGGAGGAGA
GGGTGGGGCTTACTTGTTTTTAGCTTTTTTTTTGCAGACTACACAGAATGCAGTTGTCTT
GACCTCAGGTCTGTCTGTTCTGTTGGCAAGTAATAATGCAGTACTGTTCTGACCTGCTGC
TATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTATGTTTCCCCCAATGCT
TGGAGTAGTGATTGTTGAAGGAAAATCCACTGAGTGATAAAAGGCTGAGTGTTGAGGAAA
TTTCTGCAGCTTTAAGCATTCATGTTTGTGATTGAAGCAGTCCTTTTTTGCTGTGCTTTA
GGTAAAATGCTTTTTGTTCACTTCTGGTAGGGGGGGTGGGGGAGGGCACTGAANCCTTTA
NTCTTTTCCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATTGATGACCATTTAATAATTCCAGGCACATGGCCATAGAGACCCTCTAAATAAATAA
GGAATAAATACTTATTAGGCAGGTGGGAGATTATGATCAGAAGAACAGGTAACTACACCT
ACGCATTTTTCAGAAAGTCAGGAGTCGAAATTGACAGTACTGAAGTATAATGCGGTCCAC
ATTTCCAAAGTTTGCATGTTAAATTGAAATGCTTACCATCTCATCTAGTGTTAGCCAATG
CTTTACACTTATTAGCCTTTTATATAGACACTTGGTGGGGGGCATGTGGGTTTTTTAAAG
AACTTTCCTTTGCAGAGGCTTCGTTTCATCCTTCATGAGGCTGTTCAGGATTTTGACTTG
CATATAAACGCTTGGCTCTGCCTTCTGTTCTCCTAGTGGGTGTGTGAGACCTTGCAGTGA
GTTTTCAGCATACTCAAGTAAAAATTTTTTTCCCCCTGATTTTGGAGGGAAGGGAGGAGA
GGGTGGGGCTTACTTGTTTTTAGCTTTTTTTTTGCAGACTACACAGAATGCAGTTGTCTT
GACCTCAGGTCTGTCTGTTCTGTTGGCAAGTAATAATGCAGTACTGTTCTGACCTGCTGC
TATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTATGTTTCCCCCAATGCT
TGGAGTAGTGATTGTTGAAGGAAAATCCACTGAGTGATAAAAGGCTGAGTGTTGAGGAAA
TTTCTGCAGCTTTAAGCATTCATGTTTGTGATTGAAGCAGTCCTTTTTTGCTGTGCTTTA
GGTAAAATGCTTTTTGTTCACTTCTGGTAGGGGGGGTGGGGGAGGGCACTGAANCCTTTA
NTCTTTTCCAGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-852, gnl|bosTau2|chr29 (38600978-38601847)
               

               
               1-852, gnl|Hg17|chr11 (65027874-65028705)
               

               
               1-852, gnl|Mm7|chr19 (5693003-5692189)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-852, gnl|bosTau2|chr29 (38600978-38601847)
               

               
               1-852, gnl|Hg17|chr11 (65027874-65028705)
               

               
               1-852, gnl|Mm7|chr19 (5693003-5692189)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               med (0.116252)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	1-852, gnl\|bosTau2\|chr29 (38600978-38601847)
	1-852, gnl\|Hg17\|chr11 (65027874-65028705)
	1-852, gnl\|Mm7\|chr19 (5693003-5692189)