Non-Coding RNA Search

Ss1.1-Bra1-olf_061_A06.5

Sequence:


               
               AATTCGGCACGAGGGGCAGNGATGGGCCGCGGCGTCCGGCCCCTGCGCGCCTGATGAACG
CAGCCCCGGTCCGGGAGACCCGAGCGTGCGCGGGGCCTGACCTGGCTGCGCCCCCAACTC
CGCGGACGAGGGCCGCTGGGCTCGGCCCGCTGAGGGCGCGGCTGCTCCGGAGAGGCGGGA
AGGAACGGTCCCGAGATGGCCCGGCGAGCAGGCGCTTTGGCAGTGGGTGCCCTACGCGTG
GTACAGGCACCGGCACATTCCCGGGTCTGGTAACTGGTCGACGCCAGATGGACCTTGACC
CGCGCCGGGGCACCGCGTTCCTGCCAAGCCAAGACTAGAGGGGCACGGTTGGAGAGCGCT
GGGGGGAGGTGCCCAGAGTGTCAGGCCACGCTCGCCAGCGGGGCCATGAAGATGATCCTG
GTGCGCAGGTTCCGTGTGCTCATTCTGATGGCATTCCTGGTGGCTTGCGCGCTGCACATC
GTGCTGGACCTGCTGCCCAAGCTAGAGCGGCGCTCCGCGCGGCCCTCGGGGGAACCCGGC
TGTTCGTGCGCGCAGCCTGCGGCCGAAGCGGCGGCTCCCGGCTGGGCCAAGGCGCGCGGC
CCGCCCCGCGGAGCCCCCGGCCGCAGCCTCTGCCGCTGCCGACGCGGGATGGCCCAACAA
GCACACGCTGCGTATCCTGCAGGACTTCAGCTCTGACCCTTCCTCCAACCTCACGTCCCA
CTCGCTTGAGAAACTGCCACCCGCAGCGGAACAGGCGGAGGGCGCCGTGCCGGGGCAGGA
TCCTGGCGCCCCGCGACCCCGCCACCCAGCTCACCGGCCCTTGCTCCGAGATCCCGGCCC
GCGTCCGCCGGCGCCACCCCCCGGGCCGAGTGGGGACGGCTCCCTCTTGGCCAGGCTGTT
CCAACACCCATTGTACCAGGTCCCCATTCCGCCCCTAACGGAGGACGATGTCCTCTTCAA
CGTGAACAGCGACATCAGGTTCAACCCCAAGGCGGCAGCAGCGGAGAACCCGGACTGGCC
ACACGAAGGTCCTGAGGACAACTTCCTGCCCACGGGGGAGGCGGCTGCGGACTCCTATCC
CAACTGGCTCAAATTCCACATCGGTATCAACCGGTACGAGTTGTACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTCGGCACGAGGGGCAGNGATGGGCCGCGGCGTCCGGCCCCTGCGCGCCTGATGAACG
CAGCCCCGGTCCGGGAGACCCGAGCGTGCGCGGGGCCTGACCTGGCTGCGCCCCCAACTC
CGCGGACGAGGGCCGCTGGGCTCGGCCCGCTGAGGGCGCGGCTGCTCCGGAGAGGCGGGA
AGGAACGGTCCCGAGATGGCCCGGCGAGCAGGCGCTTTGGCAGTGGGTGCCCTACGCGTG
GTACAGGCACCGGCACATTCCCGGGTCTGGTAACTGGTCGACGCCAGATGGACCTTGACC
CGCGCCGGGGCACCGCGTTCCTGCCAAGCCAAGACTAGAGGGGCACGGTTGGAGAGCGCT
GGGGGGAGGTGCCCAGAGTGTCAGGCCACGCTCGCCAGCGGGGCCATGAAGATGATCCTG
GTGCGCAGGTTCCGTGTGCTCATTCTGATGGCATTCCTGGTGGCTTGCGCGCTGCACATC
GTGCTGGACCTGCTGCCCAAGCTAGAGCGGCGCTCCGCGCGGCCCTCGGGGGAACCCGGC
TGTTCGTGCGCGCAGCCTGCGGCCGAAGCGGCGGCTCCCGGCTGGGCCAAGGCGCGCGGC
CCGCCCCGCGGAGCCCCCGGCCGCAGCCTCTGCCGCTGCCGACGCGGGATGGCCCAACAA
GCACACGCTGCGTATCCTGCAGGACTTCAGCTCTGACCCTTCCTCCAACCTCACGTCCCA
CTCGCTTGAGAAACTGCCACCCGCAGCGGAACAGGCGGAGGGCGCCGTGCCGGGGCAGGA
TCCTGGCGCCCCGCGACCCCGCCACCCAGCTCACCGGCCCTTGCTCCGAGATCCCGGCCC
GCGTCCGCCGGCGCCACCCCCCGGGCCGAGTGGGGACGGCTCCCTCTTGGCCAGGCTGTT
CCAACACCCATTGTACCAGGTCCCCATTCCGCCCCTAACGGAGGACGATGTCCTCTTCAA
CGTGAACAGCGACATCAGGTTCAACCCCAAGGCGGCAGCAGCGGAGAACCCGGACTGGCC
ACACGAAGGTCCTGAGGACAACTTCCTGCCCACGGGGGAGGCGGCTGCGGACTCCTATCC
CAACTGGCTCAAATTCCACATCGGTATCAACCGGTACGAGTTGTACTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q571A3_MOUSE

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q571A3_MOUSE

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               14-698, gnl|bosTau2|chr4 (789605-788911)
               


               
               1017-1128, gnl|bosTau2|chr4 (787061-786950)
               

               
               1017-1128, gnl|Hg17|chr7 (290636-290750)
               

               
               1017-1128, gnl|Mm7|chr5 (137729910-137730024)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-698, gnl|bosTau2|chr4 (789605-788911)
               


               
               1017-1128, gnl|bosTau2|chr4 (787061-786950)
               

               
               1017-1128, gnl|Hg17|chr7 (290636-290750)
               

               
               1017-1128, gnl|Mm7|chr5 (137729910-137730024)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eru (0.120048)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	14-698, gnl\|bosTau2\|chr4 (789605-788911)

	1017-1128, gnl\|bosTau2\|chr4 (787061-786950)
	1017-1128, gnl\|Hg17\|chr7 (290636-290750)
	1017-1128, gnl\|Mm7\|chr5 (137729910-137730024)