Non-Coding RNA Search

Ss1.1-Bra1-olf_111_F08.5

Sequence:


               
               CTCANCCGGTCGGTTCCCGAGCGCGTTCCTGGTGACCCCGCCGTGGGTGTGTAGGGAGGA
CGGACAGAGTGACCAGACGCCGACCGGGGCCGGAAGAAGCGAGCTAGCACCATGCGTGAG
ATCGTGCACATCCAGGCGGGCCAGTGCNGGCAATCAGATCGGCGCCAAGGTGGGCGCTGG
GGACCCCCGGGGCGGGGGCGGGGTGGGGGCGGGGACCCGGGCTTAACGCCCTCGGGGTTC
TGGGCGCCGCGCGTCGTCCCTNAGCAGGCCCTGGGCCCTCTGAACGCAGACTTTCCTGGC
TGCTTTGTGCCGCCGAGAGGGGCGTGGACCTGGAGGCGACTTTGGCGGGGGCGGGGGAGG
AACCTTTCTTAACTTTCTGCGGTAACTCGTTTGGAATCCCGGTCCCTCGGCCTCCCCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCANCCGGTCGGTTCCCGAGCGCGTTCCTGGTGACCCCGCCGTGGGTGTGTAGGGAGGA
CGGACAGAGTGACCAGACGCCGACCGGGGCCGGAAGAAGCGAGCTAGCACCATGCGTGAG
ATCGTGCACATCCAGGCGGGCCAGTGCNGGCAATCAGATCGGCGCCAAGGTGGGCGCTGG
GGACCCCCGGGGCGGGGGCGGGGTGGGGGCGGGGACCCGGGCTTAACGCCCTCGGGGTTC
TGGGCGCCGCGCGTCGTCCCTNAGCAGGCCCTGGGCCCTCTGAACGCAGACTTTCCTGGC
TGCTTTGTGCCGCCGAGAGGGGCGTGGACCTGGAGGCGACTTTGGCGGGGGCGGGGGAGG
AACCTTTCTTAACTTTCTGCGGTAACTCGTTTGGAATCCCGGTCCCTCGGCCTCCCCTTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-418, gnl|bosTau2|chr23 (31859746-31859338)
               

               
               1-418, gnl|Hg17|chr6 (3172886-3172492)
               

               
               1-418, gnl|Mm7|chr13 (33547900-33547498)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-418, gnl|bosTau2|chr23 (31859746-31859338)
               

               
               1-418, gnl|Hg17|chr6 (3172886-3172492)
               

               
               1-418, gnl|Mm7|chr13 (33547900-33547498)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	1-418, gnl\|bosTau2\|chr23 (31859746-31859338)
	1-418, gnl\|Hg17\|chr6 (3172886-3172492)
	1-418, gnl\|Mm7\|chr13 (33547900-33547498)