Ss1.1-Bra1-olf_Con30.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTATGTCCTCTGCGTGCTGCTGATGGGACGTCAGCGAAATCAGGTTCACAGAATGATTGC AGAGTTCAAGCTGATCCCCGGGCTGAATAATTTGTTTGACAAACTGATTTGGAGGAAGCA TTCAGCGTCTGCCCTTGTGCTCCATGGTCACAACCAGAACTGTGACTGTAGCCCGGACAT CACCTTGAAGATACAGTTTTTGAGGCTCCTCCAGAGTTTCAGCGACCACCATGAGAACAA GTACCTACTGCTCAACAACCAAGAGCTGAACGAACTCAGTGCCATCTCTCTCAAGGCCAA CATCCCCGAGGTGGAAGCCGTCCTCAACACTGACAGGAGTTTGGTGTGTGATGGGAAGAG GGGCTTATTAACTCGTCTGCTGCAGGTCATGAAGAAGGAGCCAGCTGAGTCATCTTTCAG GTTTTGGCAAGCTCGGGCTGTGGAGAGTTTCCTCCGAGGGACCACCTCCTATGCAGACCA GATGTTCCTGCTGAAGCGAGGCCTTCTAGAGCACATCCTCTACTGCATCGTGGACAGTGA GTGCAAGTCACGGGATGTGCTCCAGAGTTACTTTGACCTCCTGGGGGAGCTGATGAAATT CAATGTTGATGCATTCAAGAGGTTCAACAAGTACATCAACACTGATGCAAAGTTCCAGGT GTTCCTGAAGCAGATCAACAGCTCGCTGGTGGACTCCAACATGCTGGTGCGCTGTGTCAC TTTGTCATTGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTATGTCCTCTGCGTGCTGCTGATGGGACGTCAGCGAAATCAGGTTCACAGAATGATTGC AGAGTTCAAGCTGATCCCCGGGCTGAATAATTTGTTTGACAAACTGATTTGGAGGAAGCA TTCAGCGTCTGCCCTTGTGCTCCATGGTCACAACCAGAACTGTGACTGTAGCCCGGACAT CACCTTGAAGATACAGTTTTTGAGGCTCCTCCAGAGTTTCAGCGACCACCATGAGAACAA GTACCTACTGCTCAACAACCAAGAGCTGAACGAACTCAGTGCCATCTCTCTCAAGGCCAA CATCCCCGAGGTGGAAGCCGTCCTCAACACTGACAGGAGTTTGGTGTGTGATGGGAAGAG GGGCTTATTAACTCGTCTGCTGCAGGTCATGAAGAAGGAGCCAGCTGAGTCATCTTTCAG GTTTTGGCAAGCTCGGGCTGTGGAGAGTTTCCTCCGAGGGACCACCTCCTATGCAGACCA GATGTTCCTGCTGAAGCGAGGCCTTCTAGAGCACATCCTCTACTGCATCGTGGACAGTGA GTGCAAGTCACGGGATGTGCTCCAGAGTTACTTTGACCTCCTGGGGGAGCTGATGAAATT CAATGTTGATGCATTCAAGAGGTTCAACAAGTACATCAACACTGATGCAAAGTTCCAGGT GTTCCTGAAGCAGATCAACAGCTCGCTGGTGGACTCCAACATGCTGGTGCGCTGTGTCAC TTTGTCATTGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
| 40-176, gnl|bosTau2|chr13 (46535695-46535831) | |
| 40-176, gnl|canFam2|chr24 (27023954-27024123) | |
| 40-176, gnl|danRer3|chr10 (9789749-9789904) | |
| 40-176, gnl|dasNov1|scaffold_14323 (16107-16011) | |
| 40-176, gnl|fr1|chrUn (4058421-4058278) | |
| 40-176, gnl|galGal2|chr20 (2441369-2441199) | |
| 40-176, gnl|hg17|chr20 (33067466-33067635) | |
| 40-176, gnl|Hg17|chr20 (33067607-33067471) | |
| 40-176, gnl|mm7|chr2 (155385780-155385949) | |
| 40-176, gnl|Mm7|chr2 (155385921-155385785) | |
| 40-176, gnl|monDom2|scaffold_6 (11946035-11945867) | |
| 40-176, gnl|oryCun1|scaffold_104982 (4711-4544) | |
| 40-176, gnl|rheMac2|chr10 (29544545-29544372) | |
| 40-176, gnl|rn3|chr3 (146055539-146055699) | |
| 40-176, gnl|tetNig1|chr11 (9165852-9165716) | |
| 40-176, gnl|xenTro1|scaffold_35 (3136457-3136290) | |
| 235-337, gnl|bosTau2|chr13 (46539017-46539119) | |
| 235-337, gnl|canFam2|chr24 (27019838-27019999) | |
| 235-337, gnl|danRer3|chr10 (9789405-9789541) | |
| 235-337, gnl|dasNov1|scaffold_129784 (4890-5051) | |
| 235-337, gnl|echTel1|scaffold_309010 (202427-202586) | |
| 235-337, gnl|fr1|chrUn (4058823-4058668) | |
| 235-337, gnl|galGal2|chr20 (2444423-2444274) | |
| 235-337, gnl|hg17|chr20 (33061648-33061810) | |
| 235-337, gnl|Hg17|chr20 (33061752-33061650) | |
| 235-337, gnl|loxAfr1|scaffold_90615 (4060-4220) | |
| 235-337, gnl|mm7|chr2 (155382444-155382602) | |
| 235-337, gnl|Mm7|chr2 (155382548-155382446) | |
| 235-337, gnl|monDom2|scaffold_6 (11950279-11950116) | |
| 235-337, gnl|oryCun1|scaffold_104982 (8544-8384) | |
| 235-337, gnl|panTro1|chr21 (35070854-35070992) | |
| 235-337, gnl|rheMac2|chr10 (29549070-29548908) | |
| 235-337, gnl|rn3|chr3 (146052438-146052594) | |
| 235-337, gnl|tetNig1|chr11 (9166193-9166088) | |
| 510-652, gnl|bosTau2|chr13 (46542726-46542868) | |
| 510-652, gnl|canFam2|chr24 (27016451-27016605) | |
| 510-652, gnl|danRer3|chr10 (9786919-9787065) | |
| 510-652, gnl|dasNov1|scaffold_129784 (1284-1438) | |
| 510-652, gnl|echTel1|scaffold_309010 (199356-199509) | |
| 510-652, gnl|fr1|chrUn (4059299-4059145) | |
| 510-652, gnl|galGal2|chr20 (2446992-2446844) | |
| 510-652, gnl|hg17|chr20 (33057889-33058043) | |
| 510-652, gnl|Hg17|chr20 (33058041-33057899) | |
| 510-652, gnl|loxAfr1|scaffold_18804 (32297-32451) | |
| 510-652, gnl|mm7|chr2 (155378896-155379050) | |
| 510-652, gnl|Mm7|chr2 (155379048-155378906) | |
| 510-652, gnl|monDom2|scaffold_6 (11953178-11953007) | |
| 510-652, gnl|oryCun1|scaffold_210665 (107141-107284) | |
| 510-652, gnl|panTro1|chr21 (35067097-35067251) | |
| 510-652, gnl|rheMac2|chr10 (29552628-29552474) | |
| 510-652, gnl|rn3|chr3 (146048894-146049048) | |
| 510-652, gnl|tetNig1|chr11 (9166681-9166530) | |
| 510-652, gnl|xenTro1|scaffold_35 (3140504-3140357) |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 40-176, gnl|bosTau2|chr13 (46535695-46535831) | |
| 40-176, gnl|canFam2|chr24 (27023954-27024123) | |
| 40-176, gnl|danRer3|chr10 (9789749-9789904) | |
| 40-176, gnl|dasNov1|scaffold_14323 (16107-16011) | |
| 40-176, gnl|fr1|chrUn (4058421-4058278) | |
| 40-176, gnl|galGal2|chr20 (2441369-2441199) | |
| 40-176, gnl|hg17|chr20 (33067466-33067635) | |
| 40-176, gnl|Hg17|chr20 (33067607-33067471) | |
| 40-176, gnl|mm7|chr2 (155385780-155385949) | |
| 40-176, gnl|Mm7|chr2 (155385921-155385785) | |
| 40-176, gnl|monDom2|scaffold_6 (11946035-11945867) | |
| 40-176, gnl|oryCun1|scaffold_104982 (4711-4544) | |
| 40-176, gnl|rheMac2|chr10 (29544545-29544372) | |
| 40-176, gnl|rn3|chr3 (146055539-146055699) | |
| 40-176, gnl|tetNig1|chr11 (9165852-9165716) | |
| 40-176, gnl|xenTro1|scaffold_35 (3136457-3136290) | |
| 235-337, gnl|bosTau2|chr13 (46539017-46539119) | |
| 235-337, gnl|canFam2|chr24 (27019838-27019999) | |
| 235-337, gnl|danRer3|chr10 (9789405-9789541) | |
| 235-337, gnl|dasNov1|scaffold_129784 (4890-5051) | |
| 235-337, gnl|echTel1|scaffold_309010 (202427-202586) | |
| 235-337, gnl|fr1|chrUn (4058823-4058668) | |
| 235-337, gnl|galGal2|chr20 (2444423-2444274) | |
| 235-337, gnl|hg17|chr20 (33061648-33061810) | |
| 235-337, gnl|Hg17|chr20 (33061752-33061650) | |
| 235-337, gnl|loxAfr1|scaffold_90615 (4060-4220) | |
| 235-337, gnl|mm7|chr2 (155382444-155382602) | |
| 235-337, gnl|Mm7|chr2 (155382548-155382446) | |
| 235-337, gnl|monDom2|scaffold_6 (11950279-11950116) | |
| 235-337, gnl|oryCun1|scaffold_104982 (8544-8384) | |
| 235-337, gnl|panTro1|chr21 (35070854-35070992) | |
| 235-337, gnl|rheMac2|chr10 (29549070-29548908) | |
| 235-337, gnl|rn3|chr3 (146052438-146052594) | |
| 235-337, gnl|tetNig1|chr11 (9166193-9166088) | |
| 510-652, gnl|bosTau2|chr13 (46542726-46542868) | |
| 510-652, gnl|canFam2|chr24 (27016451-27016605) | |
| 510-652, gnl|danRer3|chr10 (9786919-9787065) | |
| 510-652, gnl|dasNov1|scaffold_129784 (1284-1438) | |
| 510-652, gnl|echTel1|scaffold_309010 (199356-199509) | |
| 510-652, gnl|fr1|chrUn (4059299-4059145) | |
| 510-652, gnl|galGal2|chr20 (2446992-2446844) | |
| 510-652, gnl|hg17|chr20 (33057889-33058043) | |
| 510-652, gnl|Hg17|chr20 (33058041-33057899) | |
| 510-652, gnl|loxAfr1|scaffold_18804 (32297-32451) | |
| 510-652, gnl|mm7|chr2 (155378896-155379050) | |
| 510-652, gnl|Mm7|chr2 (155379048-155378906) | |
| 510-652, gnl|monDom2|scaffold_6 (11953178-11953007) | |
| 510-652, gnl|oryCun1|scaffold_210665 (107141-107284) | |
| 510-652, gnl|panTro1|chr21 (35067097-35067251) | |
| 510-652, gnl|rheMac2|chr10 (29552628-29552474) | |
| 510-652, gnl|rn3|chr3 (146048894-146049048) | |
| 510-652, gnl|tetNig1|chr11 (9166681-9166530) | |
| 510-652, gnl|xenTro1|scaffold_35 (3140504-3140357) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ton (0.1755) | |
| pla (0.133672) | |
| med (0.116252) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ton (0.1755) | |
| pla (0.133672) | |
| med (0.116252) | |
| cty (0.10408) |