Non-Coding RNA Search

Ss1.1-Bra1-olf_Con46.5

Sequence:


               
               CAGAAAACAAAN------------AAGAGACCAGCGACTCTGAACAAGCCAAGAGGGTCC
CGGGAGGTTAAGACCATGTGTCTCCTTAGAAACCACGGAGACCAGGAGACACGACATGAC
ACAGTCAGAGGCGCGAACGAAACCTCCATCAGGGACGTGACATCCAAGAAGTCCCCGCAT
GGCACAGCGGGTTTAGGATCCTGCATTGTTGCAGTGCTGGCAGAGGTCACAGCAGTGGCT
CCAGTTTGATCCCTTGGCCCTGGAAACGTATATGCAGCAGGCATAGCCCAAAAAAGGGCA
GCATCCAGCAAAAACTCCCCCAACGTGAAGGCGAAATGCAATGGCCTTGGGTCAGCAGAG
GCTGAGAGAAGCCGCTGCCGCAGGCCTGCCTGCAGTGCACCTGCCCCTGCTCAAGTGAAG
ACGCTGGTCCAGCGATCCCCGCGGGCTGCCCATGTCCCTGGTGGACACGGAGGGGCTGGC
CTGTATTTCTGCACACTTGGTGTCAGCAGGGCTCAGAACCGGCCACCTGCTCAGCAGCAG
GAAGTAAGGCGGCTCTCCCTTCAGTGCCTGTCTTGTCTTGTCCCCGTGTCCCTTGTCCTC
GCTCACATCTTGGCTCCTCACCCTCCAGGACCTGGCCGCGCTGCTGGAGCAGATCGGCTG
TCTGAAGTACCTGCAGGTGTTCGAGGAGCAGGACGTGGACCTCCGCATCTTTCTGACCCT
CACCGAGAGCGACCTGAAGGAAATTGGCATCACCTTGTTTGGGCCCAAGAGGAAGATGAC
CTCTGCCATCGCCCGCTGGCACAGCAGCGCCCGNCCCCCGAGTGATGCCCTGGAGCTGGC
CCTATGCCNACCCGGTTGGAACCCTAGATGCAGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAAAACAAAN------------AAGAGACCAGCGACTCTGAACAAGCCAAGAGGGTCC
CGGGAGGTTAAGACCATGTGTCTCCTTAGAAACCACGGAGACCAGGAGACACGACATGAC
ACAGTCAGAGGCGCGAACGAAACCTCCATCAGGGACGTGACATCCAAGAAGTCCCCGCAT
GGCACAGCGGGTTTAGGATCCTGCATTGTTGCAGTGCTGGCAGAGGTCACAGCAGTGGCT
CCAGTTTGATCCCTTGGCCCTGGAAACGTATATGCAGCAGGCATAGCCCAAAAAAGGGCA
GCATCCAGCAAAAACTCCCCCAACGTGAAGGCGAAATGCAATGGCCTTGGGTCAGCAGAG
GCTGAGAGAAGCCGCTGCCGCAGGCCTGCCTGCAGTGCACCTGCCCCTGCTCAAGTGAAG
ACGCTGGTCCAGCGATCCCCGCGGGCTGCCCATGTCCCTGGTGGACACGGAGGGGCTGGC
CTGTATTTCTGCACACTTGGTGTCAGCAGGGCTCAGAACCGGCCACCTGCTCAGCAGCAG
GAAGTAAGGCGGCTCTCCCTTCAGTGCCTGTCTTGTCTTGTCCCCGTGTCCCTTGTCCTC
GCTCACATCTTGGCTCCTCACCCTCCAGGACCTGGCCGCGCTGCTGGAGCAGATCGGCTG
TCTGAAGTACCTGCAGGTGTTCGAGGAGCAGGACGTGGACCTCCGCATCTTTCTGACCCT
CACCGAGAGCGACCTGAAGGAAATTGGCATCACCTTGTTTGGGCCCAAGAGGAAGATGAC
CTCTGCCATCGCCCGCTGGCACAGCAGCGCCCGNCCCCCGAGTGATGCCCTGGAGCTGGC
CCTATGCCNACCCGGTTGGAACCCTAGATGCAGGAG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               290-753, gnl|bosTau2|chr25 (4631521-4631048)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               290-753, gnl|bosTau2|chr25 (4631521-4631048)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               ute (0.132784)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ute (0.132784)