Non-Coding RNA Search

Ss1.1-CorL-UMC-pd12cl-002-b11.3

Sequence:


               
               CAAAACAGCTTAAAGAATGATGAACTCCTTTGTTATCTGGCCCTCCTTTTCGGGAAGAGC
AAGGTTTACATTAAACAAACGTCTTTGGCCAATGGTACTCAACATTCACTAAAACCTTGC
ACACTCTGGCTTGTCTGTCTAGCTTACTGTGTATCTCACTTTTCTTCTACATTTAGCATT
ACAAATTAAAATGTTTACAATCTAAGAAAAAAAAAGACTTCAATACCAGTTGATGTACGA
GGCTTTGCCTATAGTTTTCCCTAAAATGTATACCTATTTTGGTAAACTCTTTCAAAGCCA
GTTTTAGAAATTATTAATAGTAGAATTAGATTTCTGTTTCCTGAATTGAAAAATCAAACA
TGTTTATCTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAACAGCTTAAAGAATGATGAACTCCTTTGTTATCTGGCCCTCCTTTTCGGGAAGAGC
AAGGTTTACATTAAACAAACGTCTTTGGCCAATGGTACTCAACATTCACTAAAACCTTGC
ACACTCTGGCTTGTCTGTCTAGCTTACTGTGTATCTCACTTTTCTTCTACATTTAGCATT
ACAAATTAAAATGTTTACAATCTAAGAAAAAAAAAGACTTCAATACCAGTTGATGTACGA
GGCTTTGCCTATAGTTTTCCCTAAAATGTATACCTATTTTGGTAAACTCTTTCAAAGCCA
GTTTTAGAAATTATTAATAGTAGAATTAGATTTCTGTTTCCTGAATTGAAAAATCAAACA
TGTTTATCTTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-372, gnl|bosTau2|chr21 (4295304-4295659)
               

               
               10-372, gnl|Hg17|chr15 (97746830-97747192)
               

               
               10-372, gnl|Mm7|chr7 (63368536-63368225)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-372, gnl|bosTau2|chr21 (4295304-4295659)
               

               
               10-372, gnl|Hg17|chr15 (97746830-97747192)
               

               
               10-372, gnl|Mm7|chr7 (63368536-63368225)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bfe (0.149858)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.149858)

	10-372, gnl\|bosTau2\|chr21 (4295304-4295659)
	10-372, gnl\|Hg17\|chr15 (97746830-97747192)
	10-372, gnl\|Mm7\|chr7 (63368536-63368225)