Non-Coding RNA Search

Ss1.1-Emb1-C0005189_C07.5

Sequence:


               
               GTCAAATTTTCAGTATTTTAACTACCTCAATAATACTATGAATGTAAGATATTGGGATAG
AGATCCCAACTTGAAACAACAACTGGTGCCTATGGTAATTTAATGTCTTGTCAAATGCTT
TTACTGACTGGTTTAAATGTCATTCTTGTTATAGAAGAATATGCCTTTTAAAAAGCTTAT
AATAACACTTTCCCAGTTTATATTTAAAAAAGCTAAAGAACACTGGATTAATTTTTTTTG
GGGGGGTAGAATAAAATAAATAATTGGTTCCTATTGCTGCATACCCAGAGTGGGATGGGA
TGGGGGTGGTTGGAGAACCAGAACTATTTTTAAAACATTAGGTTTCAATATAAACACAAC
TCACAACTGCTAGCTTTGGGGGAAGGGTGGGGGGAGTTGTGTGGGTTTTGTTTTGTTTAA
TTTATTGATTAGTCTTTAAGGTAGGTTTTTGTTTTTGTTTTTTGAGATTACCGGACCATC
ATTAAATGTGTACTGTGAAGAAATTAATGGTATGTGTAACGGGCTTTACCAAAGTCCATT
AAACACTACTCAAGTACAGACTGCAAACCAAAATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCAAATTTTCAGTATTTTAACTACCTCAATAATACTATGAATGTAAGATATTGGGATAG
AGATCCCAACTTGAAACAACAACTGGTGCCTATGGTAATTTAATGTCTTGTCAAATGCTT
TTACTGACTGGTTTAAATGTCATTCTTGTTATAGAAGAATATGCCTTTTAAAAAGCTTAT
AATAACACTTTCCCAGTTTATATTTAAAAAAGCTAAAGAACACTGGATTAATTTTTTTTG
GGGGGGTAGAATAAAATAAATAATTGGTTCCTATTGCTGCATACCCAGAGTGGGATGGGA
TGGGGGTGGTTGGAGAACCAGAACTATTTTTAAAACATTAGGTTTCAATATAAACACAAC
TCACAACTGCTAGCTTTGGGGGAAGGGTGGGGGGAGTTGTGTGGGTTTTGTTTTGTTTAA
TTTATTGATTAGTCTTTAAGGTAGGTTTTTGTTTTTGTTTTTTGAGATTACCGGACCATC
ATTAAATGTGTACTGTGAAGAAATTAATGGTATGTGTAACGGGCTTTACCAAAGTCCATT
AAACACTACTCAAGTACAGACTGCAAACCAAAATGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-576, gnl|bosTau2|chr26 (7491714-7492291)
               

               
               1-576, gnl|Hg17|chr10 (97809939-97810504)
               

               
               1-576, gnl|Mm7|chr19 (40741756-40742304)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-576, gnl|bosTau2|chr26 (7491714-7492291)
               

               
               1-576, gnl|Hg17|chr10 (97809939-97810504)
               

               
               1-576, gnl|Mm7|chr19 (40741756-40742304)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cte (0.29274)
               

               
               lnt (0.142308)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)
               

               
               lnt (0.142308)
               

               
               tra (0.123092)

	1-576, gnl\|bosTau2\|chr26 (7491714-7492291)
	1-576, gnl\|Hg17\|chr10 (97809939-97810504)
	1-576, gnl\|Mm7\|chr19 (40741756-40742304)