Non-Coding RNA Search

Ss1.1-Emb1-C0005189_P10.5

Sequence:


               
               GGGGAAGGTTTGATGACCGTGGACGAAGTGACTATGACGGCATTGGCAGCCGTGGTGACA
GAGGTGGCTTTGGCAAATATGAACGTGGTGGAAATAGTCGCTGGTGTGACAAATCAGATG
AAGATGATTGGTCAAAACCACTTCCACCAAGTGAACGCTTGGAACAGGAACTCTTTTCTG
GAGGCAACACTGGGATTAACTTTGAAAAATATGATGACATTCCAGTTGAGGCAACAGGCA
ACAACTGTCCTCCACATATTGAAAGTTTCAGCGATGTTGAGATGGGAGAAATTATTATGG
GAAACATTGAGCTTACTCGTTATACTCGCCCGACTCCAGTGCAAAAACATGCTATTCCTA
TTATCAAGGAGAAGAGAGACCTGATGGCTTGTGCCCAAACAGGGTCTGGAAAAACCGCAG
CATTTCTTTTGCCCATCTTGAGTCAGATTTATTCAGATGGTCCAGGCGAGGCTTTGAGGG
CCATGAAGGAAAATGGAAGGTATGGGCGCCGCAAACAATACCCAATCTCCTTGGTATTAG
CACCAACTAGAGAACTGGCAGTACAGATCTATGAGGAAGCCAGGAAATTTTCATACCGAT
CTAGAGTTCGTCCTTGCGTGGTTTATGGTGGTGCTGATATTGGTCAGCAGATTCGAGACT
TAGAACGTGGATGCCACTTGTTAGTAGCCACTCCGGGACGTCTGGTGGATATGATGGAAA
GAGGAAAGATAGGATTAGACTTCTGCAAATACTTGGTGTTAGATGAAGCTGATCGGATGT
TGGATATGGGGTTCGAACCTCAAATACGTAGAATTGTTGAACAAGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGAAGGTTTGATGACCGTGGACGAAGTGACTATGACGGCATTGGCAGCCGTGGTGACA
GAGGTGGCTTTGGCAAATATGAACGTGGTGGAAATAGTCGCTGGTGTGACAAATCAGATG
AAGATGATTGGTCAAAACCACTTCCACCAAGTGAACGCTTGGAACAGGAACTCTTTTCTG
GAGGCAACACTGGGATTAACTTTGAAAAATATGATGACATTCCAGTTGAGGCAACAGGCA
ACAACTGTCCTCCACATATTGAAAGTTTCAGCGATGTTGAGATGGGAGAAATTATTATGG
GAAACATTGAGCTTACTCGTTATACTCGCCCGACTCCAGTGCAAAAACATGCTATTCCTA
TTATCAAGGAGAAGAGAGACCTGATGGCTTGTGCCCAAACAGGGTCTGGAAAAACCGCAG
CATTTCTTTTGCCCATCTTGAGTCAGATTTATTCAGATGGTCCAGGCGAGGCTTTGAGGG
CCATGAAGGAAAATGGAAGGTATGGGCGCCGCAAACAATACCCAATCTCCTTGGTATTAG
CACCAACTAGAGAACTGGCAGTACAGATCTATGAGGAAGCCAGGAAATTTTCATACCGAT
CTAGAGTTCGTCCTTGCGTGGTTTATGGTGGTGCTGATATTGGTCAGCAGATTCGAGACT
TAGAACGTGGATGCCACTTGTTAGTAGCCACTCCGGGACGTCTGGTGGATATGATGGAAA
GAGGAAAGATAGGATTAGACTTCTGCAAATACTTGGTGTTAGATGAAGCTGATCGGATGT
TGGATATGGGGTTCGAACCTCAAATACGTAGAATTGTTGAACAAGATA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61885893|ref|XP_587193.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61885893|ref|XP_587193.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-828, gnl|bosTau2|chrX (28777817-28778637)
               

               
               2-828, gnl|Hg17|chrX (40957118-40960766)
               

               
               2-828, gnl|Mm7|chrX (11719311-11722627)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-828, gnl|bosTau2|chrX (28777817-28778637)
               

               
               2-828, gnl|Hg17|chrX (40957118-40960766)
               

               
               2-828, gnl|Mm7|chrX (11719311-11722627)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ste (0.135208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ste (0.135208)

	2-828, gnl\|bosTau2\|chrX (28777817-28778637)
	2-828, gnl\|Hg17\|chrX (40957118-40960766)
	2-828, gnl\|Mm7\|chrX (11719311-11722627)