Ss1.1-Emb1-C0005191_K11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCAATGGAGACAGCTTTTCCCCAGACCTGGCCCTGGACTCACCAGGTACTGACCACTTTG TCATCATTGCCCAACTGAAAGAAGAAGTAGCCACTCTGAAGAAGATGCTGCATCAAAAGG ATCAAATGATTTTAGAGAAAGAGAAGAAGATCACAGAGTTGAAGGCTGATTTTCAATACC AAGAATCTCAGATGAGAGCAAAAATGAACCAGATGGAGAAAACCCACAAAGAAGTCACAG AACAATTACAGGTGACTGCTTATTTAATGTAGCAACTCTGGTGTATTTAGCTGATGATAC TTTAAGTGATCATCTCTTAGATTTCTTTTTCTCAAAGAATTGACAGATCACAATAATCTA CCTTGTAGATGTCTTTTACTGTTTTACTCTTGGATGTGCTCTTCCCCTCCAAAACAGTGA AATTAATAAATGTGTTCTTTGATTTTTGGATAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCAATGGAGACAGCTTTTCCCCAGACCTGGCCCTGGACTCACCAGGTACTGACCACTTTG TCATCATTGCCCAACTGAAAGAAGAAGTAGCCACTCTGAAGAAGATGCTGCATCAAAAGG ATCAAATGATTTTAGAGAAAGAGAAGAAGATCACAGAGTTGAAGGCTGATTTTCAATACC AAGAATCTCAGATGAGAGCAAAAATGAACCAGATGGAGAAAACCCACAAAGAAGTCACAG AACAATTACAGGTGACTGCTTATTTAATGTAGCAACTCTGGTGTATTTAGCTGATGATAC TTTAAGTGATCATCTCTTAGATTTCTTTTTCTCAAAGAATTGACAGATCACAATAATCTA CCTTGTAGATGTCTTTTACTGTTTTACTCTTGGATGTGCTCTTCCCCTCCAAAACAGTGA AATTAATAAATGTGTTCTTTGATTTTTGGATAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 11-149, gnl|bosTau2|chr2 (75916561-75916699) | |
| 11-149, gnl|canFam2|chr2 (75487032-75486854) | |
| 11-149, gnl|canFam2|chr2 (75487032-75486896) | |
| 11-149, gnl|danRer3|chr5 (15514466-15514584) | |
| 11-149, gnl|dasNov1|scaffold_4197 (102855-102685) | |
| 11-149, gnl|dasNov1|scaffold_54648 (1561-1425) | |
| 11-149, gnl|echTel1|scaffold_180686 (1182-1049) | |
| 11-149, gnl|echTel1|scaffold_180686 (1182-1047) | |
| 11-149, gnl|fr1|chrUn (49729495-49729339) | |
| 11-149, gnl|galGal2|chrUn (147047868-147048049) | |
| 11-149, gnl|hg17|chr1 (27765847-27766025) | |
| 11-149, gnl|Hg17|chr1 (27765845-27765983) | |
| 11-149, gnl|hg17|chr18 (27717508-27717642) | |
| 11-149, gnl|loxAfr1|scaffold_3479 (127959-128137) | |
| 11-149, gnl|loxAfr1|scaffold_3479 (127959-128093) | |
| 11-149, gnl|mm7|chr4 (132282469-132282294) | |
| 11-149, gnl|Mm7|chr4 (132282469-132282331) | |
| 11-149, gnl|mm7|chr6 (119918800-119918939) | |
| 11-149, gnl|monDom2|scaffold_147 (205874-206020) | |
| 11-149, gnl|monDom2|scaffold_147 (205874-206010) | |
| 11-149, gnl|oryCun1|scaffold_207386 (46045-45894) | |
| 11-149, gnl|oryCun1|scaffold_207386 (46045-45909) | |
| 11-149, gnl|panTro1|chr1 (28455264-28455442) | |
| 11-149, gnl|panTro1|chr17 (23630917-23631051) | |
| 11-149, gnl|rheMac2|chr1 (30448325-30448503) | |
| 11-149, gnl|rheMac2|chr18 (24810161-24810295) | |
| 11-149, gnl|rn3|chr5 (152248956-152249130) | |
| 11-149, gnl|rn3|chr5 (152248956-152249093) | |
| 11-149, gnl|tetNig1|chrUn_random (103571078-103571195) | |
| 295-454, gnl|bosTau2|chr2 (75920287-75920459) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 11-149, gnl|bosTau2|chr2 (75916561-75916699) | |
| 11-149, gnl|canFam2|chr2 (75487032-75486854) | |
| 11-149, gnl|canFam2|chr2 (75487032-75486896) | |
| 11-149, gnl|danRer3|chr5 (15514466-15514584) | |
| 11-149, gnl|dasNov1|scaffold_4197 (102855-102685) | |
| 11-149, gnl|dasNov1|scaffold_54648 (1561-1425) | |
| 11-149, gnl|echTel1|scaffold_180686 (1182-1049) | |
| 11-149, gnl|echTel1|scaffold_180686 (1182-1047) | |
| 11-149, gnl|fr1|chrUn (49729495-49729339) | |
| 11-149, gnl|galGal2|chrUn (147047868-147048049) | |
| 11-149, gnl|hg17|chr1 (27765847-27766025) | |
| 11-149, gnl|Hg17|chr1 (27765845-27765983) | |
| 11-149, gnl|hg17|chr18 (27717508-27717642) | |
| 11-149, gnl|loxAfr1|scaffold_3479 (127959-128137) | |
| 11-149, gnl|loxAfr1|scaffold_3479 (127959-128093) | |
| 11-149, gnl|mm7|chr4 (132282469-132282294) | |
| 11-149, gnl|Mm7|chr4 (132282469-132282331) | |
| 11-149, gnl|mm7|chr6 (119918800-119918939) | |
| 11-149, gnl|monDom2|scaffold_147 (205874-206020) | |
| 11-149, gnl|monDom2|scaffold_147 (205874-206010) | |
| 11-149, gnl|oryCun1|scaffold_207386 (46045-45894) | |
| 11-149, gnl|oryCun1|scaffold_207386 (46045-45909) | |
| 11-149, gnl|panTro1|chr1 (28455264-28455442) | |
| 11-149, gnl|panTro1|chr17 (23630917-23631051) | |
| 11-149, gnl|rheMac2|chr1 (30448325-30448503) | |
| 11-149, gnl|rheMac2|chr18 (24810161-24810295) | |
| 11-149, gnl|rn3|chr5 (152248956-152249130) | |
| 11-149, gnl|rn3|chr5 (152248956-152249093) | |
| 11-149, gnl|tetNig1|chrUn_random (103571078-103571195) | |
| 295-454, gnl|bosTau2|chr2 (75920287-75920459) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) |