Non-Coding RNA Search

Ss1.1-Emb1-C0005193_L08.5

Sequence:


               
               TATCCTTGACTTGAAGTGAAAAGAATAGCCTGGATAGAAGAGTGGAAAAGTAAATAAGAA
ACTTGTGATACAAACAGTCTGCTTTTCCTCAGTGCTATTAAAGGTATCAGCAAATAAAAA
AAAAAAAAATCAGTGCTTTCTACCACTGCTGCATGAATATACTGCTCTGGAATTAGGAGG
AAGTGTAATTCAGAAATAAGAAATAGTGGAATTTAATCATAATCATGTGCCATATATGCC
TACCTAACAATTATTTCTCTATTTCTCAACTGGATGTCTTTCAATAAATAAGAATTTATC
ATTTATTTTCTGCAACTTTCTATATCTCTCATTCTTTAAAATCCTTAATGTTCTAACAAA
AAGGTCATGATTAGAGGCACAGCAGAAAAAAATTTAAGTCCAAAAAACTCAAGGGTTGAA
AATTATATACTTAAAATGAAAGATGTCTATATCTTACATTCATACTAGGATAAATACCTA
GGACCTAACCTTAAAATAACTACTATTTAAAAATCATATTTGTACCAATGCACGTAGACT
AATACGATATCCTTGACTTGAAGTGAAAAGAATAGCCTGGATAGAAGAGTGGAAAAGTAA
ATAAGAAACTTGTGATACAAACAGTCTGCTTTTCCTCAGTGCTATTAAAGGTATCAGCAA
ATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATCCTTGACTTGAAGTGAAAAGAATAGCCTGGATAGAAGAGTGGAAAAGTAAATAAGAA
ACTTGTGATACAAACAGTCTGCTTTTCCTCAGTGCTATTAAAGGTATCAGCAAATAAAAA
AAAAAAAAATCAGTGCTTTCTACCACTGCTGCATGAATATACTGCTCTGGAATTAGGAGG
AAGTGTAATTCAGAAATAAGAAATAGTGGAATTTAATCATAATCATGTGCCATATATGCC
TACCTAACAATTATTTCTCTATTTCTCAACTGGATGTCTTTCAATAAATAAGAATTTATC
ATTTATTTTCTGCAACTTTCTATATCTCTCATTCTTTAAAATCCTTAATGTTCTAACAAA
AAGGTCATGATTAGAGGCACAGCAGAAAAAAATTTAAGTCCAAAAAACTCAAGGGTTGAA
AATTATATACTTAAAATGAAAGATGTCTATATCTTACATTCATACTAGGATAAATACCTA
GGACCTAACCTTAAAATAACTACTATTTAAAAATCATATTTGTACCAATGCACGTAGACT
AATACGATATCCTTGACTTGAAGTGAAAAGAATAGCCTGGATAGAAGAGTGGAAAAGTAA
ATAAGAAACTTGTGATACAAACAGTCTGCTTTTCCTCAGTGCTATTAAAGGTATCAGCAA
ATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               124-329, gnl|bosTau2|chr17 (5558302-5558507)
               

               
               124-329, gnl|Hg17|chr4 (148913823-148914001)
               


               
               368-667, gnl|bosTau2|chr17 (5558510-5558816)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               124-329, gnl|bosTau2|chr17 (5558302-5558507)
               

               
               124-329, gnl|Hg17|chr4 (148913823-148914001)
               


               
               368-667, gnl|bosTau2|chr17 (5558510-5558816)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bfe (0.149858)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.149858)

	124-329, gnl\|bosTau2\|chr17 (5558302-5558507)
	124-329, gnl\|Hg17\|chr4 (148913823-148914001)

	368-667, gnl\|bosTau2\|chr17 (5558510-5558816)