Non-Coding RNA Search

Ss1.1-Emb1-C0005194_J10.5

Sequence:


               
               TCTGCCAAAAGACAACCCTCACTCTCCATCAAAGAATTCACACGGGGGAAAAACCTTATA
TTTGCAATGAATGCGGCAAGTCCTTCCGCCAGAAGGCAATACTAACTGTTCATCAGAGAA
TACATACAGGAGAGAAATCCAATGGATGCCCTCAGTGTGGGAAAGCCTTTAGTAGGAAAT
CAAACCTCATTCGCCATCAGAAAACTCACACAGGAGAAAAACCATATGAATGTAAAGAAT
GTGGGAAGTTCTTCAGTTGTAAGTCAAACCTCATTGTCCATCAGAAAACTCACAAAATAG
AAACTGTGGGAATTCACTAAGAGATAGGACTTTTTGGGTGAAAACTTCTTAAGTCATAGT
AAACCCTGAACATGATGTTGCTTGCAAGTATAATAATATTAAACAGTTTAAGGTACTATA
CCACATATTTACCTACTATTTGCTAGTCTATAAAACACACAGAAAGAATGGCTAGACAAA
TGAAATGACAAAAGTCATTGAAAATACAAGCTTAAATTTTTTGTTAGATTCACCATACAT
AAACTTCCTCTATCAAGTTGCTATAAACATTTAAAACTGGCTTATTTTCAATTTTGATAC
ATAACTTCTTGTGACCCAGTAATAAACAGTAAGCTGCCTGGCAGTGGTCCATGGACAACA
CTGTGAAAAGAGGTGCTTTAAAAGAAAAGAGGTGTAACTATTTCTCATTGCAACTATGGA
ATAAAAATTAGTTGTCACTTCTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGCCAAAAGACAACCCTCACTCTCCATCAAAGAATTCACACGGGGGAAAAACCTTATA
TTTGCAATGAATGCGGCAAGTCCTTCCGCCAGAAGGCAATACTAACTGTTCATCAGAGAA
TACATACAGGAGAGAAATCCAATGGATGCCCTCAGTGTGGGAAAGCCTTTAGTAGGAAAT
CAAACCTCATTCGCCATCAGAAAACTCACACAGGAGAAAAACCATATGAATGTAAAGAAT
GTGGGAAGTTCTTCAGTTGTAAGTCAAACCTCATTGTCCATCAGAAAACTCACAAAATAG
AAACTGTGGGAATTCACTAAGAGATAGGACTTTTTGGGTGAAAACTTCTTAAGTCATAGT
AAACCCTGAACATGATGTTGCTTGCAAGTATAATAATATTAAACAGTTTAAGGTACTATA
CCACATATTTACCTACTATTTGCTAGTCTATAAAACACACAGAAAGAATGGCTAGACAAA
TGAAATGACAAAAGTCATTGAAAATACAAGCTTAAATTTTTTGTTAGATTCACCATACAT
AAACTTCCTCTATCAAGTTGCTATAAACATTTAAAACTGGCTTATTTTCAATTTTGATAC
ATAACTTCTTGTGACCCAGTAATAAACAGTAAGCTGCCTGGCAGTGGTCCATGGACAACA
CTGTGAAAAGAGGTGCTTTAAAAGAAAAGAGGTGTAACTATTTCTCATTGCAACTATGGA
ATAAAAATTAGTTGTCACTTCTCA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               7-316, gnl|bosTau2|chr17 (22552051-22551740)
               

               
               7-316, gnl|Mm7|chr5 (109295321-109295630)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-316, gnl|bosTau2|chr17 (22552051-22551740)
               

               
               7-316, gnl|Mm7|chr5 (109295321-109295630)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               cbe (0.478469)
               

               
               fce (0.271592)
               

               
               fcc (0.197785)
               

               
               lin (0.145603)
               

               
               tra (0.123092)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.478469)
               

               
               fce (0.271592)
               

               
               fcc (0.197785)
               

               
               lin (0.145603)
               

               
               tra (0.123092)

	7-316, gnl\|bosTau2\|chr17 (22552051-22551740)
	7-316, gnl\|Mm7\|chr5 (109295321-109295630)

	cbe (0.478469)
	fce (0.271592)
	fcc (0.197785)
	lin (0.145603)
	tra (0.123092)