Ss1.1-Emb1-C0005213_C06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAACAAGTTCTCCAACCCCTGGTGCTACGAGAACTTCATCCAGGCGCGTTCTCTGCGCCG GGCCCAGGACATTCGCAAGCAGATGTTAGGCATAATGGACAGACACAAGCTGGACGTGGT CTCCTGTGGCAAGTCCACCGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGAA CGCTGCCAAGAAAGACCCGCAGGAAGGTTACCGGACCCTGATTGACCAGCAGGTGGTCTA CATCCATCCTTCCAGCGCTCTCTTCAACAGGCAGCCCGAATGGGTGGTCTACCACGAGCT GGTGCTGACCACAAAGGAGTACATGCGCGAGGTCACCACCATCGACCCCCGGTGGCTCGT GGAGTTTGCACCGGCCTTCTTCAAGGTCTCCGACCCGACCAAGCTCAGCAAGCAGAAGAA GCAGCAGCGTCTTGAACCCTTGTACAACCGCTATGAGGAACCCAATGCCTGGAGAATATC CCGAGCCTTCCGGCGGCGCTGAAAGACAGGCGTCTGTCTGCCTCTCCTGCAGCCGTGGGC CAGGGCTTGGCCTCGCTCTCGTCGATGCCCGTCCTGAGGATACAGCTGTCCAGGGACTGG ATATCTGAACCAGGCATTTCCTAAACTTGACTCCCATTTCTTCCCTGGTGGTGAAAATAG AAACAGGGATTTACGCCTGGTTTGACCAGAGCCTCCAGGCTGCACCCCCCCAAGGCGCTG AGGCCAGAGGGGCTCACAGCCAACGTGGGGGCCCACTGCATCACCTGCAAGAAGGAGGCA ACTTCTGGAACCCTAGGATGGGAAAGGGGAGTCAGGGCATCTGACTCCTGGACTCGGGGA GGCCCTGAGGCCCTGGCCGGCATCTCTCTGGAGGAGGGAGGCAAGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAACAAGTTCTCCAACCCCTGGTGCTACGAGAACTTCATCCAGGCGCGTTCTCTGCGCCG GGCCCAGGACATTCGCAAGCAGATGTTAGGCATAATGGACAGACACAAGCTGGACGTGGT CTCCTGTGGCAAGTCCACCGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGAA CGCTGCCAAGAAAGACCCGCAGGAAGGTTACCGGACCCTGATTGACCAGCAGGTGGTCTA CATCCATCCTTCCAGCGCTCTCTTCAACAGGCAGCCCGAATGGGTGGTCTACCACGAGCT GGTGCTGACCACAAAGGAGTACATGCGCGAGGTCACCACCATCGACCCCCGGTGGCTCGT GGAGTTTGCACCGGCCTTCTTCAAGGTCTCCGACCCGACCAAGCTCAGCAAGCAGAAGAA GCAGCAGCGTCTTGAACCCTTGTACAACCGCTATGAGGAACCCAATGCCTGGAGAATATC CCGAGCCTTCCGGCGGCGCTGAAAGACAGGCGTCTGTCTGCCTCTCCTGCAGCCGTGGGC CAGGGCTTGGCCTCGCTCTCGTCGATGCCCGTCCTGAGGATACAGCTGTCCAGGGACTGG ATATCTGAACCAGGCATTTCCTAAACTTGACTCCCATTTCTTCCCTGGTGGTGAAAATAG AAACAGGGATTTACGCCTGGTTTGACCAGAGCCTCCAGGCTGCACCCCCCCAAGGCGCTG AGGCCAGAGGGGCTCACAGCCAACGTGGGGGCCCACTGCATCACCTGCAAGAAGGAGGCA ACTTCTGGAACCCTAGGATGGGAAAGGGGAGTCAGGGCATCTGACTCCTGGACTCGGGGA GGCCCTGAGGCCCTGGCCGGCATCTCTCTGGAGGAGGGAGGCAAGAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 2-113, gnl|bosTau2|chr19 (38679156-38679045) | |
| 2-113, gnl|canFam2|chr9 (23054481-23054263) | |
| 2-113, gnl|danRer3|chr12 (26241723-26241988) | |
| 2-113, gnl|dasNov1|scaffold_16675 (19149-18930) | |
| 2-113, gnl|echTel1|scaffold_112110 (1017-798) | |
| 2-113, gnl|fr1|chrUn (120633129-120633339) | |
| 2-113, gnl|galGal2|chr27 (2096756-2096964) | |
| 2-113, gnl|hg17|chr17 (38954246-38954466) | |
| 2-113, gnl|Hg17|chr17 (38954359-38954475) | |
| 2-113, gnl|loxAfr1|scaffold_36533 (7144-7364) | |
| 2-113, gnl|mm7|chr11 (101873167-101873387) | |
| 2-113, gnl|Mm7|chr11 (101873280-101873397) | |
| 2-113, gnl|monDom2|scaffold_18 (53896083-53896303) | |
| 2-113, gnl|oryCun1|scaffold_211843 (50177-49957) | |
| 2-113, gnl|panTro1|chr19 (42136835-42137055) | |
| 2-113, gnl|rheMac2|chr16 (53538199-53538419) | |
| 2-113, gnl|rn3|chr10 (90817210-90817427) | |
| 2-113, gnl|tetNig1|chrUn_random (47474856-47474603) | |
| 2-113, gnl|xenTro1|scaffold_131 (755027-755244) | |
| 282-888, gnl|bosTau2|chr19 (38677706-38677099) | |
| 282-888, gnl|Hg17|chr17 (38956521-38957118) | |
| 282-888, gnl|Mm7|chr11 (101875678-101876305) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-113, gnl|bosTau2|chr19 (38679156-38679045) | |
| 2-113, gnl|canFam2|chr9 (23054481-23054263) | |
| 2-113, gnl|danRer3|chr12 (26241723-26241988) | |
| 2-113, gnl|dasNov1|scaffold_16675 (19149-18930) | |
| 2-113, gnl|echTel1|scaffold_112110 (1017-798) | |
| 2-113, gnl|fr1|chrUn (120633129-120633339) | |
| 2-113, gnl|galGal2|chr27 (2096756-2096964) | |
| 2-113, gnl|hg17|chr17 (38954246-38954466) | |
| 2-113, gnl|Hg17|chr17 (38954359-38954475) | |
| 2-113, gnl|loxAfr1|scaffold_36533 (7144-7364) | |
| 2-113, gnl|mm7|chr11 (101873167-101873387) | |
| 2-113, gnl|Mm7|chr11 (101873280-101873397) | |
| 2-113, gnl|monDom2|scaffold_18 (53896083-53896303) | |
| 2-113, gnl|oryCun1|scaffold_211843 (50177-49957) | |
| 2-113, gnl|panTro1|chr19 (42136835-42137055) | |
| 2-113, gnl|rheMac2|chr16 (53538199-53538419) | |
| 2-113, gnl|rn3|chr10 (90817210-90817427) | |
| 2-113, gnl|tetNig1|chrUn_random (47474856-47474603) | |
| 2-113, gnl|xenTro1|scaffold_131 (755027-755244) | |
| 282-888, gnl|bosTau2|chr19 (38677706-38677099) | |
| 282-888, gnl|Hg17|chr17 (38956521-38957118) | |
| 282-888, gnl|Mm7|chr11 (101875678-101876305) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| cga (0.279096) | |
| nep (0.183925) | |
| pty (0.142714) | |
| med (0.116252) | |
| cty (0.10408) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cga (0.279096) | |
| nep (0.183925) | |
| pty (0.142714) | |
| med (0.116252) | |
| cty (0.10408) |