Non-Coding RNA Search

Ss1.1-Emb1-C0005215_E10.5

Sequence:


               
               GGAGTGAACATTAATATCTGAAACTATATGAAAGGTTTAATTGCCTATAATTATATACAA
ATCCACAGTCATCAAGGAATCTATTGTGCAGAGAGAATCATAGACTGTTGTCAGCCAATT
CATTGTGGACACCAACATTGTCTCTTCTTTGGTTGTATCATCTGCCAAAAATAGAGAACT
TTTGATCTATTCATGTGTGTTTCAGGCTGATTCAGAAGAATTAACTTGAACTTAATCACT
TTGTGTAATTTTAGGAAGGTAGCAGTTGCCCAGGGCAGTACCTGAATTAACTGTCCATTT
CAGTACATGTCAAGTGCCTTTGTTAGGGGGAAGAAGTATCTCTAGAGGAATATGAATACC
TGATTTCTCGTCATCAGGATTCTCATTTAGTTAACTGAATATTACCTTTTACTGCTCTTT
ATGGCTTATTGGAATTGGGGCTCATTGAAGACTGATCTGAGAGAGTTTCTTCTTGTGATT
TTATTTCATAAGTATGTCACCTTTCACTATTTATAGTGTTCACCATGGAGTAGTGGATTA
AGTGAAAATCCAGGAGTATCCATCTGTAGTTATGTGCTGAAGTGATGATTCATCTAACAT
ATTTGTTAGCATAGGTGTTAATGCCTCAATTTCTGTCGCAAATTGGTGATAGTGAAATTT
CAAAAAGTGATTTTCTAGTCTCTATACTTTTTTTGTTTAATTCTTGTAATGTTAAGCAAT
AAATAATGGTGTGCCAGTAGTCACCTCCCACCCCTGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGTGAACATTAATATCTGAAACTATATGAAAGGTTTAATTGCCTATAATTATATACAA
ATCCACAGTCATCAAGGAATCTATTGTGCAGAGAGAATCATAGACTGTTGTCAGCCAATT
CATTGTGGACACCAACATTGTCTCTTCTTTGGTTGTATCATCTGCCAAAAATAGAGAACT
TTTGATCTATTCATGTGTGTTTCAGGCTGATTCAGAAGAATTAACTTGAACTTAATCACT
TTGTGTAATTTTAGGAAGGTAGCAGTTGCCCAGGGCAGTACCTGAATTAACTGTCCATTT
CAGTACATGTCAAGTGCCTTTGTTAGGGGGAAGAAGTATCTCTAGAGGAATATGAATACC
TGATTTCTCGTCATCAGGATTCTCATTTAGTTAACTGAATATTACCTTTTACTGCTCTTT
ATGGCTTATTGGAATTGGGGCTCATTGAAGACTGATCTGAGAGAGTTTCTTCTTGTGATT
TTATTTCATAAGTATGTCACCTTTCACTATTTATAGTGTTCACCATGGAGTAGTGGATTA
AGTGAAAATCCAGGAGTATCCATCTGTAGTTATGTGCTGAAGTGATGATTCATCTAACAT
ATTTGTTAGCATAGGTGTTAATGCCTCAATTTCTGTCGCAAATTGGTGATAGTGAAATTT
CAAAAAGTGATTTTCTAGTCTCTATACTTTTTTTGTTTAATTCTTGTAATGTTAAGCAAT
AAATAATGGTGTGCCAGTAGTCACCTCCCACCCCTGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-759, gnl|bosTau2|chr24 (23479914-23480677)
               

               
               1-759, gnl|Hg17|chr18 (20284796-20285558)
               

               
               1-759, gnl|Mm7|chr18 (13340238-13341001)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-759, gnl|bosTau2|chr24 (23479914-23480677)
               

               
               1-759, gnl|Hg17|chr18 (20284796-20285558)
               

               
               1-759, gnl|Mm7|chr18 (13340238-13341001)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.143184)
               

               
               lnt (0.142308)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.143184)
               

               
               lnt (0.142308)

	1-759, gnl\|bosTau2\|chr24 (23479914-23480677)
	1-759, gnl\|Hg17\|chr18 (20284796-20285558)
	1-759, gnl\|Mm7\|chr18 (13340238-13341001)