Non-Coding RNA Search

Ss1.1-Emb1-C0005216_B05.5

Sequence:


               
               GTCGGCACCTGAAGGCTATTTCTGCACCAGGAAAGCGTCCACCCAGAGCCGGCAGCAGTG
GTGGTCCTGCAGGGAGATGATCAAATAGCCCCAGAGATGGAGTCGGGAGGCTTTGAAAGC
AAACAGGCTGTGGCTCTCAGCAGAGGAGGTTTTAAGGAAATATTTCAACCAGGACACAAC
TGCGAAAGAGTCTCTGATGGCAATAACAGAGCGTTTGTCTACGCTTTCCTTTAAAAAGGT
AAGTGACTTGCTGATACCATTTTTAATTGAGAAAAGTGACACCTGCCAACCAGCACGAAA
CATGCAAGGTTCCAGAAGGGGAGAACTAAACCATGTGAGTTTCTAGCTTTAAAAGTTCCA
GCTGCGGTTTCTGAGTGGAGAGCCTGTGGTCGCTCCCTGAGACTCAACCAGGTCGCATTT
TCCGCGTAAGAAAAGGGCACCGCGGTCTTCTGAAGTGTAGGTTGGCGCAAGGCGAAAGGC
CAAGACTTCATGAATAATGAAGGGCTTCCTATCAAAGTGTTTGGTTGGCCTAAGGACAAG
GGGTTTCCATTTTCTGGCCTTAAGGAAGGATGCAAGGGTTTGACTTGGCGTAGAAATGGG
CCGGGACATTGTCGAGAGGAAGGGCCGGGAGGAAGGGTCCTCGCCTCCATGGTCAAGTGC
CAGCACTTGATCCGGGCCAGTGCTCAGGAGCCCCAGATCAGCCTTCTGTCTGGGGAGTTT
GTTAGGAAGGAGGATGGGGCCTTGAGGAAAATCTTGTGTGTGTGTGTGTTGTCTGCAAAC
GGCCTGATGATTGTTTAATAAACACTCTGGCCTGAGTTATTTCACAGCGACTGCTCCCTG
CCACACAGTGTTGAAATTACATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCGGCACCTGAAGGCTATTTCTGCACCAGGAAAGCGTCCACCCAGAGCCGGCAGCAGTG
GTGGTCCTGCAGGGAGATGATCAAATAGCCCCAGAGATGGAGTCGGGAGGCTTTGAAAGC
AAACAGGCTGTGGCTCTCAGCAGAGGAGGTTTTAAGGAAATATTTCAACCAGGACACAAC
TGCGAAAGAGTCTCTGATGGCAATAACAGAGCGTTTGTCTACGCTTTCCTTTAAAAAGGT
AAGTGACTTGCTGATACCATTTTTAATTGAGAAAAGTGACACCTGCCAACCAGCACGAAA
CATGCAAGGTTCCAGAAGGGGAGAACTAAACCATGTGAGTTTCTAGCTTTAAAAGTTCCA
GCTGCGGTTTCTGAGTGGAGAGCCTGTGGTCGCTCCCTGAGACTCAACCAGGTCGCATTT
TCCGCGTAAGAAAAGGGCACCGCGGTCTTCTGAAGTGTAGGTTGGCGCAAGGCGAAAGGC
CAAGACTTCATGAATAATGAAGGGCTTCCTATCAAAGTGTTTGGTTGGCCTAAGGACAAG
GGGTTTCCATTTTCTGGCCTTAAGGAAGGATGCAAGGGTTTGACTTGGCGTAGAAATGGG
CCGGGACATTGTCGAGAGGAAGGGCCGGGAGGAAGGGTCCTCGCCTCCATGGTCAAGTGC
CAGCACTTGATCCGGGCCAGTGCTCAGGAGCCCCAGATCAGCCTTCTGTCTGGGGAGTTT
GTTAGGAAGGAGGATGGGGCCTTGAGGAAAATCTTGTGTGTGTGTGTGTTGTCTGCAAAC
GGCCTGATGATTGTTTAATAAACACTCTGGCCTGAGTTATTTCACAGCGACTGCTCCCTG
CCACACAGTGTTGAAATTACATTC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               147-864, gnl|bosTau2|chr11 (50206480-50207189)
               

               
               147-864, gnl|Hg17|chr2 (30776032-30775318)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               147-864, gnl|bosTau2|chr11 (50206480-50207189)
               

               
               147-864, gnl|Hg17|chr2 (30776032-30775318)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ssp (0.13552)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)

	147-864, gnl\|bosTau2\|chr11 (50206480-50207189)
	147-864, gnl\|Hg17\|chr2 (30776032-30775318)