Non-Coding RNA Search

Ss1.1-Emb1-C0005216_M17.5

Sequence:


               
               GGAGGCTTATGAGTATAGAGATGCTGCTTGGCTTCTGGTCTAGGGCTAGAAATCTCCAGT
CCTCAACACTTAAAGGAGACTTGTCCGAGCAGAGGTTAGTGCCTTATACTCCAAAGCCAA
TGTTGTAGCCTCTGGGATGGTGGGGGTTGTGGACTCACGAAGGGAGGGGGAGAACGTGTG
TATGTGTAAGAACCTAGAAGTGAAGGAGGAAGAAAAATTGATGAAGGGTGAATAAAGTGA
ATGAGGGTGATATCTGAGCTTTTCAAAAATAAAAATAATAGTAATTTTTTTACCTGACTG
TGATGTTCCTAGAGTTGGTACGTAAACAACTGGAACTGTCTGTATCTTCTTGAGGAGGGC
ATTGTATGCTGGGGAAAGAACATGGGAGATGTCACCAATGAAACATTTTCTTTGGGGGAA
GGTTTAAAGGGGCAGGTCACCACTTGGCTATAAAAAAGCAGTGAGTCTTCAAATTATTTC
AAAGTAATGTATCTATAGGAAAATTTTATTCAATGATTTTTAGAGGTATTTTCAGCTTCT
GACTAAAAGATGTGAAATGCATGTATAAATGATATATATTGTGTTGCTTGATGTTTCTAG
CTATGAATCTGAGCAAAACTACCTATAATCTAAAGTTTGGCGGTGATTTCCATTTGCGAG
TGATATATTTGCCACATTGATTTGTTGCTTCTTGGTAGTAAGTTGGGCAGAAGCTTTATT
GTCCTCTAGGTGACAAGGAGTAGGGAGGTTAAGTCACTTTCAATTGCTTGTCCCAAATTA
GATGTGATAAACAGCTAATTTTCATCCTCATTTAGTTTGTGAAATAAAATGAAGGCAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGGCTTATGAGTATAGAGATGCTGCTTGGCTTCTGGTCTAGGGCTAGAAATCTCCAGT
CCTCAACACTTAAAGGAGACTTGTCCGAGCAGAGGTTAGTGCCTTATACTCCAAAGCCAA
TGTTGTAGCCTCTGGGATGGTGGGGGTTGTGGACTCACGAAGGGAGGGGGAGAACGTGTG
TATGTGTAAGAACCTAGAAGTGAAGGAGGAAGAAAAATTGATGAAGGGTGAATAAAGTGA
ATGAGGGTGATATCTGAGCTTTTCAAAAATAAAAATAATAGTAATTTTTTTACCTGACTG
TGATGTTCCTAGAGTTGGTACGTAAACAACTGGAACTGTCTGTATCTTCTTGAGGAGGGC
ATTGTATGCTGGGGAAAGAACATGGGAGATGTCACCAATGAAACATTTTCTTTGGGGGAA
GGTTTAAAGGGGCAGGTCACCACTTGGCTATAAAAAAGCAGTGAGTCTTCAAATTATTTC
AAAGTAATGTATCTATAGGAAAATTTTATTCAATGATTTTTAGAGGTATTTTCAGCTTCT
GACTAAAAGATGTGAAATGCATGTATAAATGATATATATTGTGTTGCTTGATGTTTCTAG
CTATGAATCTGAGCAAAACTACCTATAATCTAAAGTTTGGCGGTGATTTCCATTTGCGAG
TGATATATTTGCCACATTGATTTGTTGCTTCTTGGTAGTAAGTTGGGCAGAAGCTTTATT
GTCCTCTAGGTGACAAGGAGTAGGGAGGTTAAGTCACTTTCAATTGCTTGTCCCAAATTA
GATGTGATAAACAGCTAATTTTCATCCTCATTTAGTTTGTGAAATAAAATGAAGGCAGTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               31-828, gnl|bosTau2|chr3 (8170623-8171410)
               

               
               31-828, gnl|Hg17|chr1 (150778311-150780577)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-828, gnl|bosTau2|chr3 (8170623-8171410)
               

               
               31-828, gnl|Hg17|chr1 (150778311-150780577)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               liv (0.146284)
               

               
               spl (0.143184)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)
               

               
               spl (0.143184)

	31-828, gnl\|bosTau2\|chr3 (8170623-8171410)
	31-828, gnl\|Hg17\|chr1 (150778311-150780577)