Ss1.1-Emb1-C0005217_L18.5
|
GAGAAAGAAGCGACTTGAGGAGATTATGAAAAGAACCAGAAGAACAGAAGCTTCAGATAA
GAAAATTGTTGATCAGAGAAATGGAGATATAGCCAAGGGAGCTCTCACTGGAGGAACAGC
AGTATCTGCACTTCCATGTGTGACAAACTCTCCAGGACAAGGAGAACCAGTGACCAGCCC
CCATGTGGCTACCTCACACCAATCAAAAGTGACTTTGGAGAGTACTCCCAATTTGGAAAA
ACAACCAAATGAAAATGGAGTATCAGTTTCAAATGAAAACTTTGAAGAAATTATCAACTT
ACCTATTGGATCTAAACAATCCAGATTAGATGTCACCAACAGTGAGAGCCCAGACATTCC
TTTGAATCCAATTTTGGCCTTTGAAGATGAAGGTTCACTTGGGCCCCTGCCTCAGGTAGA
TGGTGTCCAAACACAACAGACAGCAGAAGTTATATGAGCATTTCTTCTGAAGAACCAAAG
CAGAAATTTAAGAAGAATTTCTACAATTAATGGACCTCCTTCCATGCTACAAAAGAGCAT
TCCCCCCGCTCCAGTTTTCTAAAGATTTCTTGACCATCATTTTGAAAAGACTTTATTAAA
ACCAGCTAAGACAACAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAGAAAGAAGCGACTTGAGGAGATTATGAAAAGAACCAGAAGAACAGAAGCTTCAGATAA
GAAAATTGTTGATCAGAGAAATGGAGATATAGCCAAGGGAGCTCTCACTGGAGGAACAGC
AGTATCTGCACTTCCATGTGTGACAAACTCTCCAGGACAAGGAGAACCAGTGACCAGCCC
CCATGTGGCTACCTCACACCAATCAAAAGTGACTTTGGAGAGTACTCCCAATTTGGAAAA
ACAACCAAATGAAAATGGAGTATCAGTTTCAAATGAAAACTTTGAAGAAATTATCAACTT
ACCTATTGGATCTAAACAATCCAGATTAGATGTCACCAACAGTGAGAGCCCAGACATTCC
TTTGAATCCAATTTTGGCCTTTGAAGATGAAGGTTCACTTGGGCCCCTGCCTCAGGTAGA
TGGTGTCCAAACACAACAGACAGCAGAAGTTATATGAGCATTTCTTCTGAAGAACCAAAG
CAGAAATTTAAGAAGAATTTCTACAATTAATGGACCTCCTTCCATGCTACAAAAGAGCAT
TCCCCCCGCTCCAGTTTTCTAAAGATTTCTTGACCATCATTTTGAAAAGACTTTATTAAA
ACCAGCTAAGACAACAAAAAAAAA
|
|
gi|55627448|ref|XP_518760.1| |
Protein identifier
|
gi|55627448|ref|XP_518760.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
221-446, gnl|bosTau2|chr9 (43656925-43657150) |
|
221-446, gnl|canFam2|chr1 (31975347-31975565) |
|
221-446, gnl|dasNov1|scaffold_117779 (1431-1224) |
|
221-446, gnl|echTel1|scaffold_258217 (7528-7748) |
|
221-446, gnl|galGal2|chr3 (54082208-54081985) |
|
221-446, gnl|hg17|chr1 (42948141-42948359) |
|
221-446, gnl|Hg17|chr6 (136708912-136708687) |
|
221-446, gnl|loxAfr1|scaffold_23362 (36600-36820) |
|
221-446, gnl|mm7|chr10 (20003005-20002788) |
|
221-446, gnl|Mm7|chr10 (20002787-20003009) |
|
221-446, gnl|monDom2|scaffold_0 (73836187-73835964) |
|
221-446, gnl|oryCun1|scaffold_214233 (6869-7089) |
|
221-446, gnl|panTro1|chr1 (43923088-43923306) |
|
221-446, gnl|rheMac2|chr1 (45708680-45708895) |
|
221-446, gnl|rn3|chr1 (15550130-15549915) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
221-446, gnl|bosTau2|chr9 (43656925-43657150) |
|
221-446, gnl|canFam2|chr1 (31975347-31975565) |
|
221-446, gnl|dasNov1|scaffold_117779 (1431-1224) |
|
221-446, gnl|echTel1|scaffold_258217 (7528-7748) |
|
221-446, gnl|galGal2|chr3 (54082208-54081985) |
|
221-446, gnl|hg17|chr1 (42948141-42948359) |
|
221-446, gnl|Hg17|chr6 (136708912-136708687) |
|
221-446, gnl|loxAfr1|scaffold_23362 (36600-36820) |
|
221-446, gnl|mm7|chr10 (20003005-20002788) |
|
221-446, gnl|Mm7|chr10 (20002787-20003009) |
|
221-446, gnl|monDom2|scaffold_0 (73836187-73835964) |
|
221-446, gnl|oryCun1|scaffold_214233 (6869-7089) |
|
221-446, gnl|panTro1|chr1 (43923088-43923306) |
|
221-446, gnl|rheMac2|chr1 (45708680-45708895) |
|
221-446, gnl|rn3|chr1 (15550130-15549915) |
|
cte (0.29274) |
|
cbe (0.239234) |
|
tes (0.207814) |
|
sag (0.182715) |
|
ski (0.146735) |
|
lyg (0.133103) |
|
kid (0.129735) |
|
cte (0.29274) |
|
cbe (0.239234) |
|
tes (0.207814) |
|
sag (0.182715) |
|
ski (0.146735) |
|
lyg (0.133103) |
|
kid (0.129735) |
