Ss1.1-End1-UMC-pd10en3-017-d12.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGGCGGGGATTATTGGCGTCTGCTGACCCCAGGGGACTACATGGTGACCGCCAGTGCTG AGGGCTACCACACAGTGACACGGAGTTGCCGGGTCACCTTTGAAGAGGGCCCTGTGCCCT GCAATTTCCACCTCACCAAGACTCCCAAACAGAGACTTCGCGAACTGCTGGCAGCTGGGG CCAAAGTGCCCCCAGACCTTCGGAGGCGGCTGGAGCGGCTCAGGGGACAGAAGGATTAAC ATCTCCAGCTGAAGAACCCCAGAGCCTTGGGCAGGCTGGACCTGTCCAGAACTGAAGGAG GGGACACAGAGTGGGGAGGGAGGGACAAAGTGGGAGTAAAGGTGCTCGGGCTCATTAAAG CTACTTTGGCCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGGCGGGGATTATTGGCGTCTGCTGACCCCAGGGGACTACATGGTGACCGCCAGTGCTG AGGGCTACCACACAGTGACACGGAGTTGCCGGGTCACCTTTGAAGAGGGCCCTGTGCCCT GCAATTTCCACCTCACCAAGACTCCCAAACAGAGACTTCGCGAACTGCTGGCAGCTGGGG CCAAAGTGCCCCCAGACCTTCGGAGGCGGCTGGAGCGGCTCAGGGGACAGAAGGATTAAC ATCTCCAGCTGAAGAACCCCAGAGCCTTGGGCAGGCTGGACCTGTCCAGAACTGAAGGAG GGGACACAGAGTGGGGAGGGAGGGACAAAGTGGGAGTAAAGGTGCTCGGGCTCATTAAAG CTACTTTGGCCCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 241-359, + strand, RNAz p=0.688935 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 241-359, + strand, RNAz p=0.688935 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC032692, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-376, gnl|bosTau2|chr13 (41365544-41365169) | |
| 1-376, gnl|Hg17|chr20 (2723074-2722720) | |
| 1-376, gnl|Mm7|chr2 (130131992-130131630) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-376, gnl|bosTau2|chr13 (41365544-41365169) | |
| 1-376, gnl|Hg17|chr20 (2723074-2722720) | |
| 1-376, gnl|Mm7|chr2 (130131992-130131630) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| nmm (0.265604) | |
| nms (0.213858) | |
| mcp (0.170648) | |
| nca (0.136874) | |
| eru (0.120048) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.265604) | |
| nms (0.213858) | |
| mcp (0.170648) | |
| nca (0.136874) | |
| eru (0.120048) |