Non-Coding RNA Search

Ss1.1-End1-UMC-pd10en3-021-g08.3

Sequence:


               
               CTTTGGGCTGCTCATGGCTTTGCAGTGCTGGCCTTAGCATATTTTGCCTATGACGACCTG
CCCAACCAGCTGCAGGAGGTGGACCTGGACTATTTTGAGGAAGCTGCCAACTTGCTACTG
GCTCATCCCAAGGTGAGAAGGCATCCTCACCTCACTTAAGTAAGTGACGGAGCCCTTCTG
GCCATGTCTTTGCTCCTGACCACTAAGTCGTCCTGACTCCATGACTGGTACATTCTCATC
CTGGAGAGCCTTGAGTCTTCTCAAGAAGAGATAGGATGCATTTCCTATTGGAGCATCACC
AGGATCCCCATCGTCAGTGGTAGCATCATTATCAAGTGTATGTGTGATTTTTCTGAGTAT
ATGTAAGGACTGCCTAGAATTAAATCCCGGATAAAATGAAAACTAGTTCTAGATCGCGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTGGGCTGCTCATGGCTTTGCAGTGCTGGCCTTAGCATATTTTGCCTATGACGACCTG
CCCAACCAGCTGCAGGAGGTGGACCTGGACTATTTTGAGGAAGCTGCCAACTTGCTACTG
GCTCATCCCAAGGTGAGAAGGCATCCTCACCTCACTTAAGTAAGTGACGGAGCCCTTCTG
GCCATGTCTTTGCTCCTGACCACTAAGTCGTCCTGACTCCATGACTGGTACATTCTCATC
CTGGAGAGCCTTGAGTCTTCTCAAGAAGAGATAGGATGCATTTCCTATTGGAGCATCACC
AGGATCCCCATCGTCAGTGGTAGCATCATTATCAAGTGTATGTGTGATTTTTCTGAGTAT
ATGTAAGGACTGCCTAGAATTAAATCCCGGATAAAATGAAAACTAGTTCTAGATCGCGAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-134, gnl|bosTau2|chr8 (48477672-48477805)
               

               
               1-134, gnl|Hg17|chr9 (101179726-101179593)
               

               
               1-134, gnl|Mm7|chr4 (49463041-49462908)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-134, gnl|bosTau2|chr8 (48477672-48477805)
               

               
               1-134, gnl|Hg17|chr9 (101179726-101179593)
               

               
               1-134, gnl|Mm7|chr4 (49463041-49462908)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cli (0.152812)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.152812)

	1-134, gnl\|bosTau2\|chr8 (48477672-48477805)
	1-134, gnl\|Hg17\|chr9 (101179726-101179593)
	1-134, gnl\|Mm7\|chr4 (49463041-49462908)