Ss1.1-End1-UMC-pd3end3-004-g04.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGAAGCAAAAAGATATGTCCAGGATAAGGATAAAACAAGTTTATGTCGCAATCTGACAAT GACTTCACTTCTTGATAAAACTCAGGAAAATCAGAAATCTCTAGAACAACTTAATGAAGC AATTCTTCAGTGCTATGAAGGAAAATCCTCCAAAGATATCCTGAAAAGAGTTGCTGCAAA TGCATTGATGTCTCTTCTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTGAAGGCCCA CCTGATAGACAGCTGCGTGGAGCGAATGAAGCACATTCATGCACAGCTGAACCTGGATTC TCTGAGGCCTGGGAGGGCAGCCCTGAAGAAAAAGGAGGATGGTTTTGTTAAAGAGTTAAG CATTGCCATGCAGCTCCTAAGAAACTGTCTTTATCAAAATGAAGAATGTAAAGAAGCAGC TCTTGAAGCTCATCTTATCCCTGTCTTGCACTCTCTCTGGCCTTGGCTTTTGATGGATGA TTCACTGATGCAAATTGCCCTGCAGCTGCTTTGTGTCTATACTGCAAATTTTCCAAACGG TTGCAGTTCTCTCTGTTGGTCCAGTTTTGGACAGTATTCTGCTCCAGCTGCACACCGAGG GGCCCCCAGTAGCTCCCTGATGCTGTGTATCCTGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGAAGCAAAAAGATATGTCCAGGATAAGGATAAAACAAGTTTATGTCGCAATCTGACAAT GACTTCACTTCTTGATAAAACTCAGGAAAATCAGAAATCTCTAGAACAACTTAATGAAGC AATTCTTCAGTGCTATGAAGGAAAATCCTCCAAAGATATCCTGAAAAGAGTTGCTGCAAA TGCATTGATGTCTCTTCTGGCTGTCAGTAGAAGAGCACAGAAACATGCTTTGAAGGCCCA CCTGATAGACAGCTGCGTGGAGCGAATGAAGCACATTCATGCACAGCTGAACCTGGATTC TCTGAGGCCTGGGAGGGCAGCCCTGAAGAAAAAGGAGGATGGTTTTGTTAAAGAGTTAAG CATTGCCATGCAGCTCCTAAGAAACTGTCTTTATCAAAATGAAGAATGTAAAGAAGCAGC TCTTGAAGCTCATCTTATCCCTGTCTTGCACTCTCTCTGGCCTTGGCTTTTGATGGATGA TTCACTGATGCAAATTGCCCTGCAGCTGCTTTGTGTCTATACTGCAAATTTTCCAAACGG TTGCAGTTCTCTCTGTTGGTCCAGTTTTGGACAGTATTCTGCTCCAGCTGCACACCGAGG GGCCCCCAGTAGCTCCCTGATGCTGTGTATCCTGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 1-130, gnl|bosTau2|chr24 (8187027-8186898) | |
| 1-130, gnl|canFam2|chr1 (11299050-11298777) | |
| 1-130, gnl|dasNov1|scaffold_135901 (5951-5676) | |
| 1-130, gnl|hg17|chr18 (65866021-65866300) | |
| 1-130, gnl|Hg17|chr18 (65866316-65866187) | |
| 1-130, gnl|loxAfr1|scaffold_16701 (8819-9050) | |
| 1-130, gnl|mm7|chr18 (89427214-89426930) | |
| 1-130, gnl|Mm7|chr18 (89426912-89427041) | |
| 1-130, gnl|monDom2|scaffold_21 (5722318-5722043) | |
| 1-130, gnl|oryCun1|scaffold_201357 (18739-18466) | |
| 1-130, gnl|panTro1|chr17 (62844464-62844743) | |
| 1-130, gnl|rheMac2|chr18 (63628066-63628345) | |
| 1-130, gnl|rn3|chr18 (86049740-86049466) | |
| 223-335, gnl|bosTau2|chr24 (8185241-8185129) | |
| 223-335, gnl|canFam2|chr1 (11307298-11307154) | |
| 223-335, gnl|dasNov1|scaffold_149 (136269-136125) | |
| 223-335, gnl|fr1|chrUn (233912520-233912386) | |
| 223-335, gnl|galGal2|chr2 (93547886-93547744) | |
| 223-335, gnl|hg17|chr18 (65848224-65848368) | |
| 223-335, gnl|Hg17|chr18 (65848339-65848227) | |
| 223-335, gnl|loxAfr1|scaffold_16701 (5428-5573) | |
| 223-335, gnl|mm7|chr18 (89432334-89432190) | |
| 223-335, gnl|Mm7|chr18 (89432217-89432329) | |
| 223-335, gnl|monDom2|scaffold_21 (5730629-5730485) | |
| 223-335, gnl|oryCun1|scaffold_201357 (30709-30565) | |
| 223-335, gnl|panTro1|chr17 (62826721-62826865) | |
| 223-335, gnl|rheMac2|chr18 (63610366-63610510) | |
| 223-335, gnl|rn3|chr18 (86057696-86057552) | |
| 223-335, gnl|tetNig1|chr6 (1803061-1802952) | |
| 416-541, gnl|bosTau2|chr24 (8180465-8180340) | |
| 416-541, gnl|Hg17|chr18 (65843061-65842936) | |
| 416-541, gnl|Mm7|chr18 (89436308-89436433) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-130, gnl|bosTau2|chr24 (8187027-8186898) | |
| 1-130, gnl|canFam2|chr1 (11299050-11298777) | |
| 1-130, gnl|dasNov1|scaffold_135901 (5951-5676) | |
| 1-130, gnl|hg17|chr18 (65866021-65866300) | |
| 1-130, gnl|Hg17|chr18 (65866316-65866187) | |
| 1-130, gnl|loxAfr1|scaffold_16701 (8819-9050) | |
| 1-130, gnl|mm7|chr18 (89427214-89426930) | |
| 1-130, gnl|Mm7|chr18 (89426912-89427041) | |
| 1-130, gnl|monDom2|scaffold_21 (5722318-5722043) | |
| 1-130, gnl|oryCun1|scaffold_201357 (18739-18466) | |
| 1-130, gnl|panTro1|chr17 (62844464-62844743) | |
| 1-130, gnl|rheMac2|chr18 (63628066-63628345) | |
| 1-130, gnl|rn3|chr18 (86049740-86049466) | |
| 223-335, gnl|bosTau2|chr24 (8185241-8185129) | |
| 223-335, gnl|canFam2|chr1 (11307298-11307154) | |
| 223-335, gnl|dasNov1|scaffold_149 (136269-136125) | |
| 223-335, gnl|fr1|chrUn (233912520-233912386) | |
| 223-335, gnl|galGal2|chr2 (93547886-93547744) | |
| 223-335, gnl|hg17|chr18 (65848224-65848368) | |
| 223-335, gnl|Hg17|chr18 (65848339-65848227) | |
| 223-335, gnl|loxAfr1|scaffold_16701 (5428-5573) | |
| 223-335, gnl|mm7|chr18 (89432334-89432190) | |
| 223-335, gnl|Mm7|chr18 (89432217-89432329) | |
| 223-335, gnl|monDom2|scaffold_21 (5730629-5730485) | |
| 223-335, gnl|oryCun1|scaffold_201357 (30709-30565) | |
| 223-335, gnl|panTro1|chr17 (62826721-62826865) | |
| 223-335, gnl|rheMac2|chr18 (63610366-63610510) | |
| 223-335, gnl|rn3|chr18 (86057696-86057552) | |
| 223-335, gnl|tetNig1|chr6 (1803061-1802952) | |
| 416-541, gnl|bosTau2|chr24 (8180465-8180340) | |
| 416-541, gnl|Hg17|chr18 (65843061-65842936) | |
| 416-541, gnl|Mm7|chr18 (89436308-89436433) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ssp (0.13552) |