Non-Coding RNA Search

Ss1.1-End1-UMC-pd3end3-008-b08.3

Sequence:


               
               TTTTTTTTTTTTTTTTTCGTACATAGGGCTATAATATATTAAATTTTTTGTTTTTAATGG
GTAAATTTTTGGGGTCGCATATTTGTATGTTTGTGCGCAATTTTTATGGGTTTTTTTGTT
TTAAAGATAGTAATTAAGTACTTGGCGTTTTGGTTTGCATACGAATGGGCTGTTCGAAAG
CATCTTGAAAGGAACAGAAAGGATTAAAGAATGCTAAATTCCGTCTGATTCTGATTGAGA
GCCGTATTCACCGGTTGGCTCGATATTACAAGACCAAACGAGTCCTTCCCCCAAACTGGA
AATACGAGTCATCCACAGCCTCTGCCCTGGTTGCATAAACTTGTTGGTTGTATGCAAAAC
AATAAAATCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTCGTACATAGGGCTATAATATATTAAATTTTTTGTTTTTAATGG
GTAAATTTTTGGGGTCGCATATTTGTATGTTTGTGCGCAATTTTTATGGGTTTTTTTGTT
TTAAAGATAGTAATTAAGTACTTGGCGTTTTGGTTTGCATACGAATGGGCTGTTCGAAAG
CATCTTGAAAGGAACAGAAAGGATTAAAGAATGCTAAATTCCGTCTGATTCTGATTGAGA
GCCGTATTCACCGGTTGGCTCGATATTACAAGACCAAACGAGTCCTTCCCCCAAACTGGA
AATACGAGTCATCCACAGCCTCTGCCCTGGTTGCATAAACTTGTTGGTTGTATGCAAAAC
AATAAAATCATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               169-367, gnl|bosTau2|chr1 (847307-847499)
               

               
               169-367, gnl|Hg17|chr15 (50175072-50175266)
               

               
               169-367, gnl|Mm7|chr7 (84467674-84467480)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               169-367, gnl|bosTau2|chr1 (847307-847499)
               

               
               169-367, gnl|Hg17|chr15 (50175072-50175266)
               

               
               169-367, gnl|Mm7|chr7 (84467674-84467480)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nms (0.213858)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.213858)

	169-367, gnl\|bosTau2\|chr1 (847307-847499)
	169-367, gnl\|Hg17\|chr15 (50175072-50175266)
	169-367, gnl\|Mm7\|chr7 (84467674-84467480)