Non-Coding RNA Search

Ss1.1-End1-UMC-pd3end3-011-c12.3

Sequence:


               
               TACCTACCAAGTGACTTGTACAAGGCACTCTCAATCTTTCCTATTTTGGCCATTGTTTTT
GTTTTGTTTTGTTTTTTAGTATTAATGACTTATTCAGTCTTTAAATACATTTTTTAAAGT
CACCACACATATAAAATAGTTATTACAAATCCTTTTATACATACATCTCTTTTGGGATAT
CGTTGGGATAAGAGATTATTGTCAAGTAAAAGACTCTAGAATTCATTGCATTACTGGAGC
AAGAATACTTTCATACTCTTTTTAAAATGGCTTATTTTTTTTTTTTTTTATCATAGATAC
CCAAGTAAATAAGCTAGTTTTTCTATCACAGTATATTGGCAAGTTTTTGCCTTTGCTGTG
GACTTGAACTTACTGTATGAAATGAGTTGAAAGCCATGTAAGAAAACAAAGCTAGAATGC
ATAAACTTAATGAAATGATGCTTAAGTGATGATTATTCAATCTCTGCTTTTAAAAATTAA
TTGCTTTTCGAGATTGCCATTCTTATCTGGCAGATGATGTGATTCTTTGAATTTTTATAA
TCTTAAAATTTTTAAGTATTTATATTTTTAAATATCATGTACATTTTGGTTCTTTAGAAT
TTATTAGATTTTGAGAGACTGTTAATTGGGGGGAGGAATGACATTAAAATTGTAAAAGAT
TTGAAAAATAATTTGTAAAACCTGTTGAATGAATAAACTGATTAATTACCCAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACCTACCAAGTGACTTGTACAAGGCACTCTCAATCTTTCCTATTTTGGCCATTGTTTTT
GTTTTGTTTTGTTTTTTAGTATTAATGACTTATTCAGTCTTTAAATACATTTTTTAAAGT
CACCACACATATAAAATAGTTATTACAAATCCTTTTATACATACATCTCTTTTGGGATAT
CGTTGGGATAAGAGATTATTGTCAAGTAAAAGACTCTAGAATTCATTGCATTACTGGAGC
AAGAATACTTTCATACTCTTTTTAAAATGGCTTATTTTTTTTTTTTTTTATCATAGATAC
CCAAGTAAATAAGCTAGTTTTTCTATCACAGTATATTGGCAAGTTTTTGCCTTTGCTGTG
GACTTGAACTTACTGTATGAAATGAGTTGAAAGCCATGTAAGAAAACAAAGCTAGAATGC
ATAAACTTAATGAAATGATGCTTAAGTGATGATTATTCAATCTCTGCTTTTAAAAATTAA
TTGCTTTTCGAGATTGCCATTCTTATCTGGCAGATGATGTGATTCTTTGAATTTTTATAA
TCTTAAAATTTTTAAGTATTTATATTTTTAAATATCATGTACATTTTGGTTCTTTAGAAT
TTATTAGATTTTGAGAGACTGTTAATTGGGGGGAGGAATGACATTAAAATTGTAAAAGAT
TTGAAAAATAATTTGTAAAACCTGTTGAATGAATAAACTGATTAATTACCCAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-712, gnl|bosTau2|chr9 (40021419-40020741)
               

               
               8-712, gnl|Hg17|chr6 (131950235-131949561)
               

               
               8-712, gnl|Mm7|chr10 (24665711-24666333)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-712, gnl|bosTau2|chr9 (40021419-40020741)
               

               
               8-712, gnl|Hg17|chr6 (131950235-131949561)
               

               
               8-712, gnl|Mm7|chr10 (24665711-24666333)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fty (0.17584)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               kid (0.129735)

	8-712, gnl\|bosTau2\|chr9 (40021419-40020741)
	8-712, gnl\|Hg17\|chr6 (131950235-131949561)
	8-712, gnl\|Mm7\|chr10 (24665711-24666333)