Ss1.1-End1-UMC-pd3end3-011-g03.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGCAGCACGATGGTGAAGGAAGGGTGGATGGTCCATTACACCAGCAGGGACACCCTGAG AAAAAGGCATTATTGGAGACTGGACAGTAAATGTTTAACATTGTTTCAAAACGAATCCGG ATCAAAGTATTATAAGGAAATTCCACTTTCAGAAATTCTCCGTATATCCTCGCCACAAGA TTTCACAAACATTTCACAAGGCAGCAACCCACACTGTTTTGAAATCATCACTGACACTAT GGTATACTTTGTTGGTGAAAACAATGGGGACAGCTCTCACAATCCTGTTCTTGCTGCCAC TGGAGTGGGACTTGATGTAGCACAGAGCTGGGAAAAAGCAATTCGTCAGGCTCTCATGCC TGTTACCCCTCAAGCAAGTGTTTGTACTTCTCCAGGGCAAGGGAAAGATCACAAAGATTT GTCTACCAGTATCTCTGTATCTAATTGTCAGATCCAGGAGAATGTGGACATCAGTACCGT TTACCAGATTTTTGCAGATGAGGTGCTTGGTTCAGGCCAATTTGGTATCGTTTATGGAGG AAAACACAGAAAGACTGGAAGGGATGTGGCTATTAAAGTAATTGATAAGATGAGATTCCC CACAAAACAGGAAAGTCAACTCCGTAATGAAGTAGCTATTTTACAGGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGCAGCACGATGGTGAAGGAAGGGTGGATGGTCCATTACACCAGCAGGGACACCCTGAG AAAAAGGCATTATTGGAGACTGGACAGTAAATGTTTAACATTGTTTCAAAACGAATCCGG ATCAAAGTATTATAAGGAAATTCCACTTTCAGAAATTCTCCGTATATCCTCGCCACAAGA TTTCACAAACATTTCACAAGGCAGCAACCCACACTGTTTTGAAATCATCACTGACACTAT GGTATACTTTGTTGGTGAAAACAATGGGGACAGCTCTCACAATCCTGTTCTTGCTGCCAC TGGAGTGGGACTTGATGTAGCACAGAGCTGGGAAAAAGCAATTCGTCAGGCTCTCATGCC TGTTACCCCTCAAGCAAGTGTTTGTACTTCTCCAGGGCAAGGGAAAGATCACAAAGATTT GTCTACCAGTATCTCTGTATCTAATTGTCAGATCCAGGAGAATGTGGACATCAGTACCGT TTACCAGATTTTTGCAGATGAGGTGCTTGGTTCAGGCCAATTTGGTATCGTTTATGGAGG AAAACACAGAAAGACTGGAAGGGATGTGGCTATTAAAGTAATTGATAAGATGAGATTCCC CACAAAACAGGAAAGTCAACTCCGTAATGAAGTAGCTATTTTACAGGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 135-413, gnl|bosTau2|chr11 (18859366-18859088) | |
| 135-413, gnl|Hg17|chr2 (37413493-37413215) | |
| 135-413, gnl|Mm7|chr17 (77267007-77266729) | |
| 538-648, gnl|bosTau2|chr11 (18853154-18853044) | |
| 538-648, gnl|canFam2|chr17 (32725309-32725420) | |
| 538-648, gnl|danRer3|chr17 (48040277-48040388) | |
| 538-648, gnl|dasNov1|scaffold_23704 (12245-12350) | |
| 538-648, gnl|echTel1|scaffold_317676 (65230-65341) | |
| 538-648, gnl|fr1|chrUn (176213618-176213507) | |
| 538-648, gnl|galGal2|chr3 (29833103-29833214) | |
| 538-648, gnl|hg17|chr2 (37406222-37406333) | |
| 538-648, gnl|Hg17|chr2 (37406332-37406222) | |
| 538-648, gnl|loxAfr1|scaffold_3391 (91561-91672) | |
| 538-648, gnl|mm7|chr17 (77259584-77259695) | |
| 538-648, gnl|Mm7|chr17 (77259694-77259584) | |
| 538-648, gnl|monDom2|scaffold_23 (39967377-39967488) | |
| 538-648, gnl|oryCun1|scaffold_204090 (66537-66426) | |
| 538-648, gnl|panTro1|chr12 (38871735-38871846) | |
| 538-648, gnl|rheMac2|chr13 (37249749-37249860) | |
| 538-648, gnl|rn3|chr6 (1739198-1739309) | |
| 538-648, gnl|tetNig1|chr10 (2744781-2744670) | |
| 538-648, gnl|xenTro1|scaffold_199 (1747430-1747540) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 135-413, gnl|bosTau2|chr11 (18859366-18859088) | |
| 135-413, gnl|Hg17|chr2 (37413493-37413215) | |
| 135-413, gnl|Mm7|chr17 (77267007-77266729) | |
| 538-648, gnl|bosTau2|chr11 (18853154-18853044) | |
| 538-648, gnl|canFam2|chr17 (32725309-32725420) | |
| 538-648, gnl|danRer3|chr17 (48040277-48040388) | |
| 538-648, gnl|dasNov1|scaffold_23704 (12245-12350) | |
| 538-648, gnl|echTel1|scaffold_317676 (65230-65341) | |
| 538-648, gnl|fr1|chrUn (176213618-176213507) | |
| 538-648, gnl|galGal2|chr3 (29833103-29833214) | |
| 538-648, gnl|hg17|chr2 (37406222-37406333) | |
| 538-648, gnl|Hg17|chr2 (37406332-37406222) | |
| 538-648, gnl|loxAfr1|scaffold_3391 (91561-91672) | |
| 538-648, gnl|mm7|chr17 (77259584-77259695) | |
| 538-648, gnl|Mm7|chr17 (77259694-77259584) | |
| 538-648, gnl|monDom2|scaffold_23 (39967377-39967488) | |
| 538-648, gnl|oryCun1|scaffold_204090 (66537-66426) | |
| 538-648, gnl|panTro1|chr12 (38871735-38871846) | |
| 538-648, gnl|rheMac2|chr13 (37249749-37249860) | |
| 538-648, gnl|rn3|chr6 (1739198-1739309) | |
| 538-648, gnl|tetNig1|chr10 (2744781-2744670) | |
| 538-648, gnl|xenTro1|scaffold_199 (1747430-1747540) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.175346) |