Non-Coding RNA Search

Ss1.1-End1-UMC-pd3end3-018-e10.3

Sequence:


               
               TCACATTGTATCAATTACTAAATCTTGTAACTGCAGGCTATGATTATACAGCCAGCTGTC
CCATGCTCTATAGTATCTTTAGGCTATCTAGAACAGCAACAGTGTGAGTAAAATTTGTAA
ATCTTAGAAGCTTCAGGTAGTCAAAGACCCTCTGGGACTCACACTGTTCATTAACATAGT
CTTTTAAAGCCCAAATACACATTTTACACTCTTCTCGTTAAAGTTTCATATTGTAGTATG
TTTTAAATAATTTGTCATTATTATCATTGCCAAGTGTTGGATATTGAGACAATTGCCTTT
CAATGTTGACTCATTTATTCCTGTCCAAAGTCTACTACTACATGCTTAAGTAAATTAAAG
GCAGTTTAATATATAGCTGGTATCCTTAAGAATTAGTCTCAGTTGGTAATTTAACATAGA
TGTCCCTTCTAAGGAATTCTTTGTGTCCTAAACAATCTTCTGACGTATTGGCATGTTTTT
TCTTCCAGCCTTGATGTTGCTTCAAATTGTCCTATAGTCTTGTGTTGTAATATTCCATGA
TTATTTCTCAAAGGAAATGTGCATATGACTCATTCTCTTCTAGCACATAGTCCCCAAACT
ATTAATCATTATACTTTATATTAAGTTTATAAAAGCAATTTTATCAAAAGAAATGAATCC
TTTTTCAGATGCATGCTTGATTTCCTGTGTTAATAAAGATCATTTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACATTGTATCAATTACTAAATCTTGTAACTGCAGGCTATGATTATACAGCCAGCTGTC
CCATGCTCTATAGTATCTTTAGGCTATCTAGAACAGCAACAGTGTGAGTAAAATTTGTAA
ATCTTAGAAGCTTCAGGTAGTCAAAGACCCTCTGGGACTCACACTGTTCATTAACATAGT
CTTTTAAAGCCCAAATACACATTTTACACTCTTCTCGTTAAAGTTTCATATTGTAGTATG
TTTTAAATAATTTGTCATTATTATCATTGCCAAGTGTTGGATATTGAGACAATTGCCTTT
CAATGTTGACTCATTTATTCCTGTCCAAAGTCTACTACTACATGCTTAAGTAAATTAAAG
GCAGTTTAATATATAGCTGGTATCCTTAAGAATTAGTCTCAGTTGGTAATTTAACATAGA
TGTCCCTTCTAAGGAATTCTTTGTGTCCTAAACAATCTTCTGACGTATTGGCATGTTTTT
TCTTCCAGCCTTGATGTTGCTTCAAATTGTCCTATAGTCTTGTGTTGTAATATTCCATGA
TTATTTCTCAAAGGAAATGTGCATATGACTCATTCTCTTCTAGCACATAGTCCCCAAACT
ATTAATCATTATACTTTATATTAAGTTTATAAAAGCAATTTTATCAAAAGAAATGAATCC
TTTTTCAGATGCATGCTTGATTTCCTGTGTTAATAAAGATCATTTCAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-708, gnl|bosTau2|chr2 (49191709-49192411)
               

               
               4-708, gnl|Hg17|chr3 (175691724-175692404)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-708, gnl|bosTau2|chr2 (49191709-49192411)
               

               
               4-708, gnl|Hg17|chr3 (175691724-175692404)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               ret (0.128733)

	4-708, gnl\|bosTau2\|chr2 (49191709-49192411)
	4-708, gnl\|Hg17\|chr3 (175691724-175692404)